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The map label for this gene is yaeJ [C]

Identifier: 193211925

GI number: 193211925

Start: 261362

End: 261778

Strand: Direct

Name: yaeJ [C]

Synonym: Cpar_0251

Alternate gene names: 193211925

Gene position: 261362-261778 (Clockwise)

Preceding gene: 193211924

Following gene: 193211927

Centisome position: 11.42

GC content: 53.0

Gene sequence:

>417_bases
ATGATCCGGATCGCCCGAGGCGTCGTCGTTGATGAGCGTGAGATCGAAATCAGAACCATGCGATCGCAGGGGGCTGGCGG
TCAGAACGTCAACAAGGTTGAAACCGCCGTTCATCTCCGGTTCGACATTGGTGCCTCATCGCTTCCCGATCACATCAAAG
AGCGGCTCATGCAGCTTCGGGATCGACGAATTTCCAAAGAGGGCATAATCGTTATCAGGGCGCAACGGTTTCGTTCGCAG
GAGAAAAATCGTCAGGATGCGCTTGACCGTTTTCAGGAGTTGTTGAAAAAGGTACTGGTCGAGCCAAAGGCGCGCAAGGC
TACCAGCCCAACCAGAAGTGCTACGAAAAAGCGTCTTGAAGAGAAGTCAAGGAGAGGTGAACTCAAAGCGTCGAGAAAGG
TGATTCGTGACGAGTGA

Upstream 100 bases:

>100_bases
TGGGCATCGAAAGTATTCTGTTCCGGAGTTGGGATGGCACGCTTGCCTCTCCAAGTCTTGCCGCCTTCGGTATTTCCTCA
TCAAGCGCAAGGGGGCAACG

Downstream 100 bases:

>100_bases
CGCCCATGAAAAGGTGGTGGCAGGGAGATGGAAAAACCCCGGTATTCCGTTAAGCATTACGCTTTGAGAATACCGGGGTT
TCTTGCTTTCGAGGCCGTAT

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MIRIARGVVVDEREIEIRTMRSQGAGGQNVNKVETAVHLRFDIGASSLPDHIKERLMQLRDRRISKEGIIVIRAQRFRSQ
EKNRQDALDRFQELLKKVLVEPKARKATSPTRSATKKRLEEKSRRGELKASRKVIRDE

Sequences:

>Translated_138_residues
MIRIARGVVVDEREIEIRTMRSQGAGGQNVNKVETAVHLRFDIGASSLPDHIKERLMQLRDRRISKEGIIVIRAQRFRSQ
EKNRQDALDRFQELLKKVLVEPKARKATSPTRSATKKRLEEKSRRGELKASRKVIRDE
>Mature_138_residues
MIRIARGVVVDEREIEIRTMRSQGAGGQNVNKVETAVHLRFDIGASSLPDHIKERLMQLRDRRISKEGIIVIRAQRFRSQ
EKNRQDALDRFQELLKKVLVEPKARKATSPTRSATKKRLEEKSRRGELKASRKVIRDE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=137, Percent_Identity=49.6350364963504, Blast_Score=137, Evalue=2e-34,
Organism=Drosophila melanogaster, GI19921098, Length=127, Percent_Identity=32.2834645669291, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16012; Mature: 16012

Theoretical pI: Translated: 11.64; Mature: 11.64

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIARGVVVDEREIEIRTMRSQGAGGQNVNKVETAVHLRFDIGASSLPDHIKERLMQLR
CEEECCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHH
DRRISKEGIIVIRAQRFRSQEKNRQDALDRFQELLKKVLVEPKARKATSPTRSATKKRLE
HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
EKSRRGELKASRKVIRDE
HHHHHCHHHHHHHHHCCC
>Mature Secondary Structure
MIRIARGVVVDEREIEIRTMRSQGAGGQNVNKVETAVHLRFDIGASSLPDHIKERLMQLR
CEEECCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHH
DRRISKEGIIVIRAQRFRSQEKNRQDALDRFQELLKKVLVEPKARKATSPTRSATKKRLE
HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
EKSRRGELKASRKVIRDE
HHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]