| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211919
Identifier: 193211919
GI number: 193211919
Start: 255775
End: 256494
Strand: Direct
Name: 193211919
Synonym: Cpar_0245
Alternate gene names: NA
Gene position: 255775-256494 (Clockwise)
Preceding gene: 193211918
Following gene: 193211920
Centisome position: 11.17
GC content: 57.64
Gene sequence:
>720_bases ATGGCAATCATAGCAACAACGTTTTTCTCCCTGCCGGTGGTCTGGCATAACGCGCTTGCCGCGTTGCTCACGCTCGTCTA TGTGTTCAGCGTGCCGCCGCTGATGGACTGGCTGGTCACCAATCACGGCCTGTCGCGCGACATCAGTCGCAAGATCACCC ATATCTGCGCCGGTTCGGTTATCGTGTTTCTGCCGTTGTTTCAGGACGGCGGCTGGTCGCAGTATCTGAACATATCTGTT TTTGCCATCTGGACGGTGCTGCTGGTGCAGAAGGGGCTGTTCGCTGCCGATGACGACCAGGCGGTCAAAACCATGACCCG CACTGGCGACAAGCGCGAGCTGCTCAAGGGGACGCTCTATTTCGTGGTCGTGGCCATGATCTGCGGCACGCTGTTCTACA AGCAGACTGCCGGGGTACTTGCAATGGCGATGCTCGGCTGGGGCGATGGACTTGCGCCCATCGTGGGCACGAAGCTCGGT AAAATGCAGTATCGCATTTTAAGCAACAAGACTGTCGAGGGTAGCATTGCGTTTTTTGCCGGGGCTTTTCTTGCTGGCCT GTTCTTCATCCAGCTCATCGTGCCGGAAGCGTACAACCCCGGCAAGATCGCTCTGATCGCGCTTGCCGCAACGGTTGTGG AGGGGGCAAGCCCGAAAGAGGTGGACAACATCCTCATCCCTGTAACGGTGATTGCGCTCTCCCTGGCGCTTTTCTCCTGA
Upstream 100 bases:
>100_bases GGCTACGATGCAACCCGGACGCATAAACGATGACGATATGACGGAGCAGATGCTGACTCCCAAACCATCTCTTCAGTTAA TTCCATAATCCGGAATCGCC
Downstream 100 bases:
>100_bases ACCGCCTTTTCGATTAATGTCCGGACTTTATTTCGTCAGCGATCTTCATCTCGGCCTGCAAGAGTCGCATGCCGAGGCGG AGAAGCTCGAACGACTCGAA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: Integral Membrane Protein; Phosphatidate Cytidylyltransferase Family Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MAIIATTFFSLPVVWHNALAALLTLVYVFSVPPLMDWLVTNHGLSRDISRKITHICAGSVIVFLPLFQDGGWSQYLNISV FAIWTVLLVQKGLFAADDDQAVKTMTRTGDKRELLKGTLYFVVVAMICGTLFYKQTAGVLAMAMLGWGDGLAPIVGTKLG KMQYRILSNKTVEGSIAFFAGAFLAGLFFIQLIVPEAYNPGKIALIALAATVVEGASPKEVDNILIPVTVIALSLALFS
Sequences:
>Translated_239_residues MAIIATTFFSLPVVWHNALAALLTLVYVFSVPPLMDWLVTNHGLSRDISRKITHICAGSVIVFLPLFQDGGWSQYLNISV FAIWTVLLVQKGLFAADDDQAVKTMTRTGDKRELLKGTLYFVVVAMICGTLFYKQTAGVLAMAMLGWGDGLAPIVGTKLG KMQYRILSNKTVEGSIAFFAGAFLAGLFFIQLIVPEAYNPGKIALIALAATVVEGASPKEVDNILIPVTVIALSLALFS >Mature_238_residues AIIATTFFSLPVVWHNALAALLTLVYVFSVPPLMDWLVTNHGLSRDISRKITHICAGSVIVFLPLFQDGGWSQYLNISVF AIWTVLLVQKGLFAADDDQAVKTMTRTGDKRELLKGTLYFVVVAMICGTLFYKQTAGVLAMAMLGWGDGLAPIVGTKLGK MQYRILSNKTVEGSIAFFAGAFLAGLFFIQLIVPEAYNPGKIALIALAATVVEGASPKEVDNILIPVTVIALSLALFS
Specific function: Unknown
COG id: COG0170
COG function: function code I; Dolichol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25816; Mature: 25685
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIATTFFSLPVVWHNALAALLTLVYVFSVPPLMDWLVTNHGLSRDISRKITHICAGSV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCH IVFLPLFQDGGWSQYLNISVFAIWTVLLVQKGLFAADDDQAVKTMTRTGDKRELLKGTLY HEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH FVVVAMICGTLFYKQTAGVLAMAMLGWGDGLAPIVGTKLGKMQYRILSNKTVEGSIAFFA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GAFLAGLFFIQLIVPEAYNPGKIALIALAATVVEGASPKEVDNILIPVTVIALSLALFS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AIIATTFFSLPVVWHNALAALLTLVYVFSVPPLMDWLVTNHGLSRDISRKITHICAGSV EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCH IVFLPLFQDGGWSQYLNISVFAIWTVLLVQKGLFAADDDQAVKTMTRTGDKRELLKGTLY HEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH FVVVAMICGTLFYKQTAGVLAMAMLGWGDGLAPIVGTKLGKMQYRILSNKTVEGSIAFFA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GAFLAGLFFIQLIVPEAYNPGKIALIALAATVVEGASPKEVDNILIPVTVIALSLALFS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA