Click here to switch to the map view.

The map label for this gene is glgA

Identifier: 193211901

GI number: 193211901

Start: 234671

End: 236137

Strand: Direct

Name: glgA

Synonym: Cpar_0227

Alternate gene names: 193211901

Gene position: 234671-236137 (Clockwise)

Preceding gene: 193211898

Following gene: 193211902

Centisome position: 10.25

GC content: 54.4

Gene sequence:

>1467_bases
ATGGCCAGACGAAATTACAAAGTTCTTTATGTCTCTGGCGAAGTCTCTCCTTTTGTAAGAGTCAGCTCGTTGGCTGATTT
TATGGCGTCATTTCCACAGGCTCTTGAAGAGGAAGGGTTTGAGGCTCGCATTATGATGCCGAAGTACGGCATTATCAATG
ACCGGAAATTCCGTCTGCATGATGTGCTCCGGCTTTCCGATATCGAGGTGCCTCTCAAGGAGAAGACCGAGATGCTGCAT
GTGAAGGTTACCGCCCTTCCGTCAAGCAAGATACAGACCTACTTTCTTTACAACGAGAAGCATTTCAAGCGGAGCGGACT
TTTTTCCGATCTCCAGCTTGGCGGTGACCACAAAGGCAGTGCCGAGAAGCTGATCTTTTTCAGCGTTGGTGTGATGGAAA
CGCTCGTTCGCCTTGGCTGGCAGCCGGACATCATCCACTGTAACGACTGGCATGCAGGCCTGGTGCCGCTGCTTGCCCGC
ACCCGCTACGCAAAGCACGACTTCTTCAAAAAAGTGAAGATCGTTCAGTCCGTGCACAACGTCTATCGCCAAGGCGTTTT
CCAGCCGAAGATGTTTCAGAAGCATCTCGACCCCGAGGTGTTCGACGGGCTTGAAAGAGAGGGCGACGACATCAATCTGC
TCGCCACAGGTATCAAGTACGCCGATCTGGTCACCACGACTTCACCTTCCTATGCCAAGCAGATCGCCAGTGATCCGGAG
AGCTCTTTCGGCATGGACAAGGCCTTGAAGGCTTGCAAGGATCGTTTCCACGGCATTCTCAACGGTATGGATACCCGCCA
GTGGAACCCCTCCAGTGACAAGCTCATCAAAAAGCGTTACAGCGCCGCTCAGCCGGAACTGAAGCTCGAGGACAAGAAGG
TGCTGCTCGAAGAGGTCGGACTGCCTTTTTCCGAAGAGACCCCTGTGGTCGGCGTGATTACGACCTTCGATGACGTTCAG
GGCATGGGGCTTCTGAAAGAGAGTCTGTCGAAGCTGCTTGAGCTTGATCTTCAGCTGATCGTTTCCGGTTCGGGCAACAA
GGAATTCGAGCAGGAGTTGCGCGATCTTGTCGAAGAGCATCCGGAGAAGCTGGCCGTGAATACGGACTTTACCGATGCGT
TTTACCACCAGATGATTGCCGGACTCGATATGCTGATTATGCCGTCGCGTATAGAGTCGTGCGGTATGAAGCAGATGTTC
GCCATGAATTACGGTACCGTGCCGATTGCCTATGCTGGCGGCGGCATCGTGGAGACCATCGAGGAGGTCTCCGGCGACAA
GGGCACCGGTTTCGTGTTTACCGACTACACGGCCGAGGCGCTGACGGCAAAACTCGGTGAGGCGCTTTCGATGTTTGACG
ACAAGGAGCGCTGGGCGGAGCTGATGCGCGAAGGCATGGAGCGCGACTTTTCATGGAGCGCTTCGGCGGAGCAGTACGCC
GAGCTCTACCGCGAAATTCTCGGCTGA

Upstream 100 bases:

>100_bases
AGCTGCTAAATTGTTTCTCAGCATGAAAATTCTTAAATTAAAAACTGAAGATATTCTATGAAAGCGTTTAGGAAAAATTT
TTAGATAGAGTTTGAGATAG

Downstream 100 bases:

>100_bases
GGAGCAGGCGATGCAGTCAGTCAAAGTCCTGTTTCTGGACAGGGACGGAACCATCAATCGCGATATCGGCAGCTACGTTT
CCAACCGCGAGGAGTTTGTG

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MARRNYKVLYVSGEVSPFVRVSSLADFMASFPQALEEEGFEARIMMPKYGIINDRKFRLHDVLRLSDIEVPLKEKTEMLH
VKVTALPSSKIQTYFLYNEKHFKRSGLFSDLQLGGDHKGSAEKLIFFSVGVMETLVRLGWQPDIIHCNDWHAGLVPLLAR
TRYAKHDFFKKVKIVQSVHNVYRQGVFQPKMFQKHLDPEVFDGLEREGDDINLLATGIKYADLVTTTSPSYAKQIASDPE
SSFGMDKALKACKDRFHGILNGMDTRQWNPSSDKLIKKRYSAAQPELKLEDKKVLLEEVGLPFSEETPVVGVITTFDDVQ
GMGLLKESLSKLLELDLQLIVSGSGNKEFEQELRDLVEEHPEKLAVNTDFTDAFYHQMIAGLDMLIMPSRIESCGMKQMF
AMNYGTVPIAYAGGGIVETIEEVSGDKGTGFVFTDYTAEALTAKLGEALSMFDDKERWAELMREGMERDFSWSASAEQYA
ELYREILG

Sequences:

>Translated_488_residues
MARRNYKVLYVSGEVSPFVRVSSLADFMASFPQALEEEGFEARIMMPKYGIINDRKFRLHDVLRLSDIEVPLKEKTEMLH
VKVTALPSSKIQTYFLYNEKHFKRSGLFSDLQLGGDHKGSAEKLIFFSVGVMETLVRLGWQPDIIHCNDWHAGLVPLLAR
TRYAKHDFFKKVKIVQSVHNVYRQGVFQPKMFQKHLDPEVFDGLEREGDDINLLATGIKYADLVTTTSPSYAKQIASDPE
SSFGMDKALKACKDRFHGILNGMDTRQWNPSSDKLIKKRYSAAQPELKLEDKKVLLEEVGLPFSEETPVVGVITTFDDVQ
GMGLLKESLSKLLELDLQLIVSGSGNKEFEQELRDLVEEHPEKLAVNTDFTDAFYHQMIAGLDMLIMPSRIESCGMKQMF
AMNYGTVPIAYAGGGIVETIEEVSGDKGTGFVFTDYTAEALTAKLGEALSMFDDKERWAELMREGMERDFSWSASAEQYA
ELYREILG
>Mature_487_residues
ARRNYKVLYVSGEVSPFVRVSSLADFMASFPQALEEEGFEARIMMPKYGIINDRKFRLHDVLRLSDIEVPLKEKTEMLHV
KVTALPSSKIQTYFLYNEKHFKRSGLFSDLQLGGDHKGSAEKLIFFSVGVMETLVRLGWQPDIIHCNDWHAGLVPLLART
RYAKHDFFKKVKIVQSVHNVYRQGVFQPKMFQKHLDPEVFDGLEREGDDINLLATGIKYADLVTTTSPSYAKQIASDPES
SFGMDKALKACKDRFHGILNGMDTRQWNPSSDKLIKKRYSAAQPELKLEDKKVLLEEVGLPFSEETPVVGVITTFDDVQG
MGLLKESLSKLLELDLQLIVSGSGNKEFEQELRDLVEEHPEKLAVNTDFTDAFYHQMIAGLDMLIMPSRIESCGMKQMFA
MNYGTVPIAYAGGGIVETIEEVSGDKGTGFVFTDYTAEALTAKLGEALSMFDDKERWAELMREGMERDFSWSASAEQYAE
LYREILG

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=495, Percent_Identity=30.1010101010101, Blast_Score=242, Evalue=3e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_CHLP8 (B3QR00)

Other databases:

- EMBL:   CP001099
- RefSeq:   YP_001997854.1
- GeneID:   6419140
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_0227
- HOGENOM:   HBG596384
- OMA:   WRRQYVG
- ProtClustDB:   PRK14098
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 55233; Mature: 55102

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: BINDING 20-20

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRNYKVLYVSGEVSPFVRVSSLADFMASFPQALEEEGFEARIMMPKYGIINDRKFRLH
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHH
DVLRLSDIEVPLKEKTEMLHVKVTALPSSKIQTYFLYNEKHFKRSGLFSDLQLGGDHKGS
HHHHHHCCCCCHHHCCEEEEEEEEECCCCCCEEEEEECCHHHHHHCCCHHHHCCCCCCCC
AEKLIFFSVGVMETLVRLGWQPDIIHCNDWHAGLVPLLARTRYAKHDFFKKVKIVQSVHN
CCEEEEEHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYRQGVFQPKMFQKHLDPEVFDGLEREGDDINLLATGIKYADLVTTTSPSYAKQIASDPE
HHHCCCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHHHHEECCCHHHHHHHHCCCC
SSFGMDKALKACKDRFHGILNGMDTRQWNPSSDKLIKKRYSAAQPELKLEDKKVLLEEVG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHCC
LPFSEETPVVGVITTFDDVQGMGLLKESLSKLLELDLQLIVSGSGNKEFEQELRDLVEEH
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHC
PEKLAVNTDFTDAFYHQMIAGLDMLIMPSRIESCGMKQMFAMNYGTVPIAYAGGGIVETI
CHHEEECCCCHHHHHHHHHHCCHHEEECHHHHHCCHHHHHHHCCCCCEEEECCCHHHHHH
EEVSGDKGTGFVFTDYTAEALTAKLGEALSMFDDKERWAELMREGMERDFSWSASAEQYA
HHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHH
ELYREILG
HHHHHHHC
>Mature Secondary Structure 
ARRNYKVLYVSGEVSPFVRVSSLADFMASFPQALEEEGFEARIMMPKYGIINDRKFRLH
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHH
DVLRLSDIEVPLKEKTEMLHVKVTALPSSKIQTYFLYNEKHFKRSGLFSDLQLGGDHKGS
HHHHHHCCCCCHHHCCEEEEEEEEECCCCCCEEEEEECCHHHHHHCCCHHHHCCCCCCCC
AEKLIFFSVGVMETLVRLGWQPDIIHCNDWHAGLVPLLARTRYAKHDFFKKVKIVQSVHN
CCEEEEEHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYRQGVFQPKMFQKHLDPEVFDGLEREGDDINLLATGIKYADLVTTTSPSYAKQIASDPE
HHHCCCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHHHHEECCCHHHHHHHHCCCC
SSFGMDKALKACKDRFHGILNGMDTRQWNPSSDKLIKKRYSAAQPELKLEDKKVLLEEVG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHCC
LPFSEETPVVGVITTFDDVQGMGLLKESLSKLLELDLQLIVSGSGNKEFEQELRDLVEEH
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHC
PEKLAVNTDFTDAFYHQMIAGLDMLIMPSRIESCGMKQMFAMNYGTVPIAYAGGGIVETI
CHHEEECCCCHHHHHHHHHHCCHHEEECHHHHHCCHHHHHHHCCCCCEEEECCCHHHHHH
EEVSGDKGTGFVFTDYTAEALTAKLGEALSMFDDKERWAELMREGMERDFSWSASAEQYA
HHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHH
ELYREILG
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA