| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is yqgV [H]
Identifier: 193211892
GI number: 193211892
Start: 218534
End: 218845
Strand: Direct
Name: yqgV [H]
Synonym: Cpar_0218
Alternate gene names: 193211892
Gene position: 218534-218845 (Clockwise)
Preceding gene: 193211891
Following gene: 193211893
Centisome position: 9.55
GC content: 59.94
Gene sequence:
>312_bases ATGGCTCTCCTCGACATTACGGTGATTCCTCTCGGTGCTGGTGGCAGCGGACTGAGCGCCTGGGTTGCCGGGCTTGAAAG GCTGCTCGAAGAGAGCGGCCTTTCGTTCAGGCTGAACGACATGGGCACGATCGTCGAAGGTTCGGCGGATGAACTGTTCG AGATTGGCCGAAAGCTGCACGAGCACTGCTTCGGCGCAGAGGTAGCGCGAGTCTACACCGTCATCAAGATCGACGACCGG CGCGACAAGCAAGTTGCCATCGGTGACAAGGTCGCTTCGGTCGAAGCCCGCAAAGCCGCGCCGGATAAATGA
Upstream 100 bases:
>100_bases CTTAAACTTTCTTAGAAACAATTGCCCCGGACTTTAGTCCGGGGTACGCAAGTAAGGTATAATAAATAAGGGCTTTAGCC CAATCTCTTCCTGCTGTTCT
Downstream 100 bases:
>100_bases AAATTATTTTTATCTTCGAGTTCTCAATTATCAAGGGTTGAGCGCCCGGAGCCACTTCGGAGCAGCCAGCACCATCTTAT AAAGTCATACTGCCATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MALLDITVIPLGAGGSGLSAWVAGLERLLEESGLSFRLNDMGTIVEGSADELFEIGRKLHEHCFGAEVARVYTVIKIDDR RDKQVAIGDKVASVEARKAAPDK
Sequences:
>Translated_103_residues MALLDITVIPLGAGGSGLSAWVAGLERLLEESGLSFRLNDMGTIVEGSADELFEIGRKLHEHCFGAEVARVYTVIKIDDR RDKQVAIGDKVASVEARKAAPDK >Mature_102_residues ALLDITVIPLGAGGSGLSAWVAGLERLLEESGLSFRLNDMGTIVEGSADELFEIGRKLHEHCFGAEVARVYTVIKIDDRR DKQVAIGDKVASVEARKAAPDK
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 11066; Mature: 10935
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLDITVIPLGAGGSGLSAWVAGLERLLEESGLSFRLNDMGTIVEGSADELFEIGRKLH CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEECCCHHHHHHHHHHHH EHCFGAEVARVYTVIKIDDRRDKQVAIGDKVASVEARKAAPDK HHHCCHHHHHEEEEEEECCCCCCEEECCCCHHHCHHCCCCCCC >Mature Secondary Structure ALLDITVIPLGAGGSGLSAWVAGLERLLEESGLSFRLNDMGTIVEGSADELFEIGRKLH EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEECCCHHHHHHHHHHHH EHCFGAEVARVYTVIKIDDRRDKQVAIGDKVASVEARKAAPDK HHHCCHHHHHEEEEEEECCCCCCEEECCCCHHHCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]