| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is manC [H]
Identifier: 193211881
GI number: 193211881
Start: 205900
End: 207021
Strand: Direct
Name: manC [H]
Synonym: Cpar_0207
Alternate gene names: 193211881
Gene position: 205900-207021 (Clockwise)
Preceding gene: 193211879
Following gene: 193211884
Centisome position: 8.99
GC content: 55.97
Gene sequence:
>1122_bases ATGGGCACGACAAAGAATTTCTGCAGCCATGTCTATGCCGTGGTCATGGCTGGGGGCATAGGCAGCAAGCTCTGGCCGCT TTCGCGCAAGCGCTATCCCAAGCAGTTTCTCCATTTTTTTGATGGCGGAACCATGATCCGCAAAACCGTCGAGCGGATTG CCCGCATCGTCAGGAAAGAGAACATCCTCATCATCACCAGCAAGCAGCACTGGCGTCTTGTGCTCGACTCGCTACCCGAT TTCGATGCCGACAACATCATCATCGAACCCACCATCAGGGATACGGCTACCTGTATCGCCCTGGCGACCACCTTCATCCG GAAACGCAATCCCGATGCCGTGACTGTCGTGCTTCCGGCTGACCACCTCGTGCACAATGAGGGGCGCTTTCTGGAAACCG TCGAGAAGGGAATTTGCATGGCGCGGGAAAAACAGGGGCTGATCACCATCGGCATCAAGCCGGATCGGCCTGAGACGCGC TACGGCTATATTCAGGTGGAAGCGTCGGTCATGATGGAGGATGAGACAGATGATGACGACATTCCCCTGTTTCGGGTAAA AACCTTTGCCGAAAAGCCTGACATTGCCACCGCCGAACAGTTTCTGCAAAGCTGTGACTTCTGGTGGAACAGCGGGGTCT TGATTTGGCACGTTGATGACATCAACCGGGAGTTCCGCCGCTCGTTGCCCGACCTGTACGAAGACATGCAGAACGTGCAT GCCTTCATCGGAACCGATCGGCAGGAGTCGGTTATCGAGGATGTCTATAGTTGGGTTCATCCGGTTTCGATCGCTTACGG CATTATGGAAAAGGCCGAAAAGGTCTACATGCTGGCCGGTGATTTCGGGTGGACCGATCTGGGATGCTGGGACGAGGTGA TCAAGGTGGGACTCGGCCTCGAAGGTCGCGATATGGACGGCAGCGAGGCGATCATGATCGATTCGAACCAGGTCTTCGTC CGCAAGCCTCACGGCAAGGCAGTGGTGACCATCGGCGTGGACGACATCATCGTGATCGATACGCCCGATGCGCTGCTGAT CTGTCGAAAGGGGCAGTCGGGTGATGTTGCCAAGGCTGTTGAGGTGATGAGGCGCGAGGAGGGGCTGGACAAGTTTTTAT GA
Upstream 100 bases:
>100_bases AACGATTCGTCTGTACAGAATGACGGGCATCTCATCGGGAGCTGAATCGGCTGTTGCCGGAATCATGACGGTGAGGGCTC GAAGGTAGAGAAAGAAAAGT
Downstream 100 bases:
>100_bases GGCGCTGACCCGCTCCCCGGCTTGAAAGCCGGGGCAACATGAATGTAAGAGGAGATGAATATCCGTTGGGCTGAAGCCCT CCTGAATGTGGGAGAGCCGG
Product: Mannose-1-phosphate guanylyltransferase (GDP)
Products: NA
Alternate protein names: GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGTTKNFCSHVYAVVMAGGIGSKLWPLSRKRYPKQFLHFFDGGTMIRKTVERIARIVRKENILIITSKQHWRLVLDSLPD FDADNIIIEPTIRDTATCIALATTFIRKRNPDAVTVVLPADHLVHNEGRFLETVEKGICMAREKQGLITIGIKPDRPETR YGYIQVEASVMMEDETDDDDIPLFRVKTFAEKPDIATAEQFLQSCDFWWNSGVLIWHVDDINREFRRSLPDLYEDMQNVH AFIGTDRQESVIEDVYSWVHPVSIAYGIMEKAEKVYMLAGDFGWTDLGCWDEVIKVGLGLEGRDMDGSEAIMIDSNQVFV RKPHGKAVVTIGVDDIIVIDTPDALLICRKGQSGDVAKAVEVMRREEGLDKFL
Sequences:
>Translated_373_residues MGTTKNFCSHVYAVVMAGGIGSKLWPLSRKRYPKQFLHFFDGGTMIRKTVERIARIVRKENILIITSKQHWRLVLDSLPD FDADNIIIEPTIRDTATCIALATTFIRKRNPDAVTVVLPADHLVHNEGRFLETVEKGICMAREKQGLITIGIKPDRPETR YGYIQVEASVMMEDETDDDDIPLFRVKTFAEKPDIATAEQFLQSCDFWWNSGVLIWHVDDINREFRRSLPDLYEDMQNVH AFIGTDRQESVIEDVYSWVHPVSIAYGIMEKAEKVYMLAGDFGWTDLGCWDEVIKVGLGLEGRDMDGSEAIMIDSNQVFV RKPHGKAVVTIGVDDIIVIDTPDALLICRKGQSGDVAKAVEVMRREEGLDKFL >Mature_372_residues GTTKNFCSHVYAVVMAGGIGSKLWPLSRKRYPKQFLHFFDGGTMIRKTVERIARIVRKENILIITSKQHWRLVLDSLPDF DADNIIIEPTIRDTATCIALATTFIRKRNPDAVTVVLPADHLVHNEGRFLETVEKGICMAREKQGLITIGIKPDRPETRY GYIQVEASVMMEDETDDDDIPLFRVKTFAEKPDIATAEQFLQSCDFWWNSGVLIWHVDDINREFRRSLPDLYEDMQNVHA FIGTDRQESVIEDVYSWVHPVSIAYGIMEKAEKVYMLAGDFGWTDLGCWDEVIKVGLGLEGRDMDGSEAIMIDSNQVFVR KPHGKAVVTIGVDDIIVIDTPDALLICRKGQSGDVAKAVEVMRREEGLDKFL
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O9 antigen [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=361, Percent_Identity=33.2409972299169, Blast_Score=184, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 42340; Mature: 42209
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTKNFCSHVYAVVMAGGIGSKLWPLSRKRYPKQFLHFFDGGTMIRKTVERIARIVRKE CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC NILIITSKQHWRLVLDSLPDFDADNIIIEPTIRDTATCIALATTFIRKRNPDAVTVVLPA CEEEEECCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECC DHLVHNEGRFLETVEKGICMAREKQGLITIGIKPDRPETRYGYIQVEASVMMEDETDDDD HHHCCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCC IPLFRVKTFAEKPDIATAEQFLQSCDFWWNSGVLIWHVDDINREFRRSLPDLYEDMQNVH CCEEEEEHHCCCCCHHHHHHHHHHCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHH AFIGTDRQESVIEDVYSWVHPVSIAYGIMEKAEKVYMLAGDFGWTDLGCWDEVIKVGLGL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCC EGRDMDGSEAIMIDSNQVFVRKPHGKAVVTIGVDDIIVIDTPDALLICRKGQSGDVAKAV CCCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCEEEEECCCEEEEEECCCCCCHHHHH EVMRREEGLDKFL HHHHHHHHHHHCC >Mature Secondary Structure GTTKNFCSHVYAVVMAGGIGSKLWPLSRKRYPKQFLHFFDGGTMIRKTVERIARIVRKE CCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC NILIITSKQHWRLVLDSLPDFDADNIIIEPTIRDTATCIALATTFIRKRNPDAVTVVLPA CEEEEECCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECC DHLVHNEGRFLETVEKGICMAREKQGLITIGIKPDRPETRYGYIQVEASVMMEDETDDDD HHHCCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCC IPLFRVKTFAEKPDIATAEQFLQSCDFWWNSGVLIWHVDDINREFRRSLPDLYEDMQNVH CCEEEEEHHCCCCCHHHHHHHHHHCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHH AFIGTDRQESVIEDVYSWVHPVSIAYGIMEKAEKVYMLAGDFGWTDLGCWDEVIKVGLGL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCC EGRDMDGSEAIMIDSNQVFVRKPHGKAVVTIGVDDIIVIDTPDALLICRKGQSGDVAKAV CCCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCEEEEECCCEEEEEECCCCCCHHHHH EVMRREEGLDKFL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7515042; 9004408 [H]