Click here to switch to the map view.

The map label for this gene is 193211820

Identifier: 193211820

GI number: 193211820

Start: 161146

End: 161352

Strand: Direct

Name: 193211820

Synonym: Cpar_0146

Alternate gene names: NA

Gene position: 161146-161352 (Clockwise)

Preceding gene: 193211819

Following gene: 193211821

Centisome position: 7.04

GC content: 55.56

Gene sequence:

>207_bases
ATGAATGCTTTATCTGAATTTGTTCGTAATCGGCGCAAGTCTTTGGGCTTGACCCAGCCTGAGCTGGCGGAGAAGGCTGG
CACGGGGCTGCGGTTTATCCGTGATCTCGAACAGGGGAAAAAGACGTTGCGGATGGACAAGGTGAACCAGGTGCTCGCCC
TGTTCGGTTACGAGCTTGGCCCTGTTCGGCAGGAGTGGGAGGAGTAA

Upstream 100 bases:

>100_bases
ATCGGGTATAAATCCATCAAAACCTCTTGCATTTATACCCGTAATGGTATAGCTTCCTTCTAAGTTATATCAACTATACC
CGATCAGTGTCTCGAGGCTT

Downstream 100 bases:

>100_bases
GCCATGCGGAAAGCCGAGGTGAAATATCTTGACCGAACAGCGGGCTGGCTTGTGCAGGATGAGGAGGGCTATCATTTCCT
GTACGATCAGGCGTACCTCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MNALSEFVRNRRKSLGLTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGYELGPVRQEWEE

Sequences:

>Translated_68_residues
MNALSEFVRNRRKSLGLTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGYELGPVRQEWEE
>Mature_68_residues
MNALSEFVRNRRKSLGLTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGYELGPVRQEWEE

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7863; Mature: 7863

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALSEFVRNRRKSLGLTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGYELG
CCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVRQEWEE
CHHHHHCC
>Mature Secondary Structure
MNALSEFVRNRRKSLGLTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGYELG
CCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVRQEWEE
CHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA