Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

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The map label for this gene is yjeE [C]

Identifier: 193211768

GI number: 193211768

Start: 106147

End: 106590

Strand: Direct

Name: yjeE [C]

Synonym: Cpar_0093

Alternate gene names: 193211768

Gene position: 106147-106590 (Clockwise)

Preceding gene: 193211767

Following gene: 193211769

Centisome position: 4.64

GC content: 62.39

Gene sequence:

>444_bases
ATGATGGCTCAGGAGATGAGGGGCGAGTTTCTGTCGCATTCGGCTGACGAGACCCGCGAGTATGCGCGGCGGTTCGCTTC
CGGGCTCGGGCCGGGCCAGACGGTTTGCCTGACCGGGACGCTTGGCGCGGGCAAGACCGAGTTCATGCGGGGCATCGCCG
AAGTGTTCGGCTGCGAGGAGCAGCTCTCCAGCCCCACCTTTTCGCTGATGAATATCTACGAGGGCTCGATGCGTGGCCGC
CCGGTCGAACTACACCATTTCGACCTGTATCGGATCGAATCGGAAAAGGAGCTTGACGCGGCGGGGTTCGACGACTATCT
TTCGGGGCCGTTTCTGTCGGTGGTCGAGTGGGGCGAGCGTTTTTCGTCGCTCGACCGGCGCTACACCCGTCGGGTGGAGC
TGCTCATTACCGGCGACGAGCAGCGGAAAATCGTCATCAGTTGA

Upstream 100 bases:

>100_bases
TGTCGGTCTCGCAGTCGGGTGAGGCGATGCCGCAGAAATCGACATGGTTCTATCCCAAGGTGATGACCGGCATGGTGTTC
CGCTCTCTGGAGGGGGATGC

Downstream 100 bases:

>100_bases
GTTGAGTCCATGAAGATTCTTGCCATCGAGTGCACCCACGGATTTGCCAGCGTCGCGGTCAGCCGAGACGGCACCATTGT
TGAACAGCGCCTCGCCGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEEQLSSPTFSLMNIYEGSMRGR
PVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGERFSSLDRRYTRRVELLITGDEQRKIVIS

Sequences:

>Translated_147_residues
MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEEQLSSPTFSLMNIYEGSMRGR
PVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGERFSSLDRRYTRRVELLITGDEQRKIVIS
>Mature_147_residues
MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEEQLSSPTFSLMNIYEGSMRGR
PVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGERFSSLDRRYTRRVELLITGDEQRKIVIS

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=103, Percent_Identity=33.0097087378641, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16659; Mature: 16659

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEE
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHH
QLSSPTFSLMNIYEGSMRGRPVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGER
HHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHH
FSSLDRRYTRRVELLITGDEQRKIVIS
HHHHHHHHHHHEEEEEECCCCCEEECC
>Mature Secondary Structure
MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEE
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHH
QLSSPTFSLMNIYEGSMRGRPVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGER
HHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHH
FSSLDRRYTRRVELLITGDEQRKIVIS
HHHHHHHHHHHEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]