| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is yjeE [C]
Identifier: 193211768
GI number: 193211768
Start: 106147
End: 106590
Strand: Direct
Name: yjeE [C]
Synonym: Cpar_0093
Alternate gene names: 193211768
Gene position: 106147-106590 (Clockwise)
Preceding gene: 193211767
Following gene: 193211769
Centisome position: 4.64
GC content: 62.39
Gene sequence:
>444_bases ATGATGGCTCAGGAGATGAGGGGCGAGTTTCTGTCGCATTCGGCTGACGAGACCCGCGAGTATGCGCGGCGGTTCGCTTC CGGGCTCGGGCCGGGCCAGACGGTTTGCCTGACCGGGACGCTTGGCGCGGGCAAGACCGAGTTCATGCGGGGCATCGCCG AAGTGTTCGGCTGCGAGGAGCAGCTCTCCAGCCCCACCTTTTCGCTGATGAATATCTACGAGGGCTCGATGCGTGGCCGC CCGGTCGAACTACACCATTTCGACCTGTATCGGATCGAATCGGAAAAGGAGCTTGACGCGGCGGGGTTCGACGACTATCT TTCGGGGCCGTTTCTGTCGGTGGTCGAGTGGGGCGAGCGTTTTTCGTCGCTCGACCGGCGCTACACCCGTCGGGTGGAGC TGCTCATTACCGGCGACGAGCAGCGGAAAATCGTCATCAGTTGA
Upstream 100 bases:
>100_bases TGTCGGTCTCGCAGTCGGGTGAGGCGATGCCGCAGAAATCGACATGGTTCTATCCCAAGGTGATGACCGGCATGGTGTTC CGCTCTCTGGAGGGGGATGC
Downstream 100 bases:
>100_bases GTTGAGTCCATGAAGATTCTTGCCATCGAGTGCACCCACGGATTTGCCAGCGTCGCGGTCAGCCGAGACGGCACCATTGT TGAACAGCGCCTCGCCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEEQLSSPTFSLMNIYEGSMRGR PVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGERFSSLDRRYTRRVELLITGDEQRKIVIS
Sequences:
>Translated_147_residues MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEEQLSSPTFSLMNIYEGSMRGR PVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGERFSSLDRRYTRRVELLITGDEQRKIVIS >Mature_147_residues MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEEQLSSPTFSLMNIYEGSMRGR PVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGERFSSLDRRYTRRVELLITGDEQRKIVIS
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=103, Percent_Identity=33.0097087378641, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16659; Mature: 16659
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEE CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHH QLSSPTFSLMNIYEGSMRGRPVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGER HHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHH FSSLDRRYTRRVELLITGDEQRKIVIS HHHHHHHHHHHEEEEEECCCCCEEECC >Mature Secondary Structure MMAQEMRGEFLSHSADETREYARRFASGLGPGQTVCLTGTLGAGKTEFMRGIAEVFGCEE CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHH QLSSPTFSLMNIYEGSMRGRPVELHHFDLYRIESEKELDAAGFDDYLSGPFLSVVEWGER HHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHH FSSLDRRYTRRVELLITGDEQRKIVIS HHHHHHHHHHHEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]