| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211767
Identifier: 193211767
GI number: 193211767
Start: 104867
End: 106150
Strand: Direct
Name: 193211767
Synonym: Cpar_0092
Alternate gene names: NA
Gene position: 104867-106150 (Clockwise)
Preceding gene: 193211766
Following gene: 193211768
Centisome position: 4.58
GC content: 62.23
Gene sequence:
>1284_bases ATGCCCGAGATTGTGCCGTTCAAGGGGATTGTTTACGGCCCCGATGTCGCCAGCGAAGCCTCGAAGCTTATCTGCCCGCC TTACGACGCCATATCTGCCGACCTGCAGCGAGCGCTGTACGAGAGTTCGGATTACAATGCGGTTCGTCTGGAGTTGCCTG CCGAAGCCGACCGCTATGCCGCTGCGGCAGCCCGGCTCCACGAATGGCTTGCCGCATCGGTCCTTGTGCAGGACGATGAG CCCGCGCTCTACCCCTGCTTTCAGACCTTCGAGGACGAGCAGGGCGTAAGCCGCACGCGCAAGGGGCTGTTCGCTGCGCT GCGACTGTATGAGCCCTCCGAGCAGAAGGTGCTGCCGCACGAGCGGACGCTTTCCGGGCCGAAGGCCGACCGGCTGAAGA TGTTTCGTGAGACCAAGGCGAACCTCAGCAGCATTTTCGGGCTGTATGCCGATCAGTCCCAACGCACCGACAAGCTGCTA TATGAGTTCGTCGAAGGGCGCGAGCCGGTTCTCGATGCCGAGTTCGACGGGGTGCGGAGTCGCATGTGGCGCATGAGCGA TCCGGCGCTGATCGCCCGGTTCGCCGCCAAACTCGATGCGCTGAAGGTGTACATCGCCGACGGGCATCATCGCTATGAAA CCGGGCTGGCGTACAGGAACGAACGGGCTGCCGCCAATCCCGGCCATACGGGGCGTGAGCCTTATAACTATATCATGGCC TATTTGTCGAACATCTACGACGAGGGGCTGCTGATCCTGCCGATTCATCGCCTGGTGCACGGACTGGAATCGTTCGATCC CGAAGCTTTCATCGCGAGTCTCGATCGCGCGTTTACCGTCTGGGAGCTGCCCGGCAGGGGGGCGCTCGACGAGTTTCTCG CCACCGGCGGACAGCAGCCGTGCTACGGAATTGTGCTGCCGGAGATGGTGCTCGGCGTTTCGCTCGATGCGAAGCCTTCG GAAGTGTTGTCGGGGCCGGTGCCCGAGGCGTTGCAGGGGCTCGATGTGGTGGTGCTGCACGACCTCGTACTTGGCCAGAT GCTTGGCATCGAGGCCGAGGCGGTCGAGAAGGAGAGCAACCTGACCTACGCCAACCGTATGGATGAGGTGTTTGACGCCG TTGCGTCGGGCAAGGCGCAGGTCGGCATCGTGCTTCGACCAACCGGAGCCGAGCAGGTGATGTCGGTCTCGCAGTCGGGT GAGGCGATGCCGCAGAAATCGACATGGTTCTATCCCAAGGTGATGACCGGCATGGTGTTCCGCTCTCTGGAGGGGGATGC ATGA
Upstream 100 bases:
>100_bases GTCGGAACAATAAAATTTCCGTCATCATCAAGGAGGGGGTCAACGATTTCTGGATTTCACAGCGAGAGCCCGTCGATTAA CCGCCTAAACCCATAAGCCC
Downstream 100 bases:
>100_bases TGGCTCAGGAGATGAGGGGCGAGTTTCTGTCGCATTCGGCTGACGAGACCCGCGAGTATGCGCGGCGGTTCGCTTCCGGG CTCGGGCCGGGCCAGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MPEIVPFKGIVYGPDVASEASKLICPPYDAISADLQRALYESSDYNAVRLELPAEADRYAAAAARLHEWLAASVLVQDDE PALYPCFQTFEDEQGVSRTRKGLFAALRLYEPSEQKVLPHERTLSGPKADRLKMFRETKANLSSIFGLYADQSQRTDKLL YEFVEGREPVLDAEFDGVRSRMWRMSDPALIARFAAKLDALKVYIADGHHRYETGLAYRNERAAANPGHTGREPYNYIMA YLSNIYDEGLLILPIHRLVHGLESFDPEAFIASLDRAFTVWELPGRGALDEFLATGGQQPCYGIVLPEMVLGVSLDAKPS EVLSGPVPEALQGLDVVVLHDLVLGQMLGIEAEAVEKESNLTYANRMDEVFDAVASGKAQVGIVLRPTGAEQVMSVSQSG EAMPQKSTWFYPKVMTGMVFRSLEGDA
Sequences:
>Translated_427_residues MPEIVPFKGIVYGPDVASEASKLICPPYDAISADLQRALYESSDYNAVRLELPAEADRYAAAAARLHEWLAASVLVQDDE PALYPCFQTFEDEQGVSRTRKGLFAALRLYEPSEQKVLPHERTLSGPKADRLKMFRETKANLSSIFGLYADQSQRTDKLL YEFVEGREPVLDAEFDGVRSRMWRMSDPALIARFAAKLDALKVYIADGHHRYETGLAYRNERAAANPGHTGREPYNYIMA YLSNIYDEGLLILPIHRLVHGLESFDPEAFIASLDRAFTVWELPGRGALDEFLATGGQQPCYGIVLPEMVLGVSLDAKPS EVLSGPVPEALQGLDVVVLHDLVLGQMLGIEAEAVEKESNLTYANRMDEVFDAVASGKAQVGIVLRPTGAEQVMSVSQSG EAMPQKSTWFYPKVMTGMVFRSLEGDA >Mature_426_residues PEIVPFKGIVYGPDVASEASKLICPPYDAISADLQRALYESSDYNAVRLELPAEADRYAAAAARLHEWLAASVLVQDDEP ALYPCFQTFEDEQGVSRTRKGLFAALRLYEPSEQKVLPHERTLSGPKADRLKMFRETKANLSSIFGLYADQSQRTDKLLY EFVEGREPVLDAEFDGVRSRMWRMSDPALIARFAAKLDALKVYIADGHHRYETGLAYRNERAAANPGHTGREPYNYIMAY LSNIYDEGLLILPIHRLVHGLESFDPEAFIASLDRAFTVWELPGRGALDEFLATGGQQPCYGIVLPEMVLGVSLDAKPSE VLSGPVPEALQGLDVVVLHDLVLGQMLGIEAEAVEKESNLTYANRMDEVFDAVASGKAQVGIVLRPTGAEQVMSVSQSGE AMPQKSTWFYPKVMTGMVFRSLEGDA
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47231; Mature: 47100
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIVPFKGIVYGPDVASEASKLICPPYDAISADLQRALYESSDYNAVRLELPAEADRYA CCCCCCCCCEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH AAAARLHEWLAASVLVQDDEPALYPCFQTFEDEQGVSRTRKGLFAALRLYEPSEQKVLPH HHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC ERTLSGPKADRLKMFRETKANLSSIFGLYADQSQRTDKLLYEFVEGREPVLDAEFDGVRS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH RMWRMSDPALIARFAAKLDALKVYIADGHHRYETGLAYRNERAAANPGHTGREPYNYIMA HHHCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH YLSNIYDEGLLILPIHRLVHGLESFDPEAFIASLDRAFTVWELPGRGALDEFLATGGQQP HHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCCC CYGIVLPEMVLGVSLDAKPSEVLSGPVPEALQGLDVVVLHDLVLGQMLGIEAEAVEKESN EEEEEHHHHHHCCCCCCCCHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCC LTYANRMDEVFDAVASGKAQVGIVLRPTGAEQVMSVSQSGEAMPQKSTWFYPKVMTGMVF CHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH RSLEGDA HHCCCCC >Mature Secondary Structure PEIVPFKGIVYGPDVASEASKLICPPYDAISADLQRALYESSDYNAVRLELPAEADRYA CCCCCCCCEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH AAAARLHEWLAASVLVQDDEPALYPCFQTFEDEQGVSRTRKGLFAALRLYEPSEQKVLPH HHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC ERTLSGPKADRLKMFRETKANLSSIFGLYADQSQRTDKLLYEFVEGREPVLDAEFDGVRS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH RMWRMSDPALIARFAAKLDALKVYIADGHHRYETGLAYRNERAAANPGHTGREPYNYIMA HHHCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH YLSNIYDEGLLILPIHRLVHGLESFDPEAFIASLDRAFTVWELPGRGALDEFLATGGQQP HHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCCC CYGIVLPEMVLGVSLDAKPSEVLSGPVPEALQGLDVVVLHDLVLGQMLGIEAEAVEKESN EEEEEHHHHHHCCCCCCCCHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCC LTYANRMDEVFDAVASGKAQVGIVLRPTGAEQVMSVSQSGEAMPQKSTWFYPKVMTGMVF CHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH RSLEGDA HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA