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The map label for this gene is 193211754

Identifier: 193211754

GI number: 193211754

Start: 92598

End: 93071

Strand: Direct

Name: 193211754

Synonym: Cpar_0079

Alternate gene names: NA

Gene position: 92598-93071 (Clockwise)

Preceding gene: 193211753

Following gene: 193211755

Centisome position: 4.04

GC content: 38.82

Gene sequence:

>474_bases
ATGGCAGGAAAAGAGTTTGATTTCATTAAAGAGTTGGGAGAGTTGCCAAAACTGGACGAAGTAAAGAAAAGGCTGGAAAG
AGTAAACACCTTTTCCTCTGCCTCTTCAGAGATAAAAGAAAGCTTGTATCTCTATGCTGCAGCCATTGCCAAACAGATGA
GTGCAGATGTCACTCCAACTCAGTTGCGACGTTATTACAGCTATATCAAGTCAATTGAATTAGTCAACAGAGATCAAAAA
GATGATGCTCCTCAAATAATTGACAAGTACAAGCTGAGCTTTCTTCTGCCAAAAATTGCAGGAAGCAGCGAAAGGAAGAA
ATTAGAATCGTTGTACGATGTCATGAAGGTATGTCTTTCAAATAACAATGGAGGCAAAATCAAGACTGTAGCTGATCTTC
GTCTCTTCGTTGAATTTTTTGAGGCGATTCTTGACTATCATGCCTCAATAGAAAAGAGTGTAAACCACAACTAA

Upstream 100 bases:

>100_bases
TGGTTTCCTATCTCTACACAACAGAAGAGAACAAAAGAAACTGGATATCTCACTTGCATATCGCACTCAACTGGCTAACC
TATCTCAGGAGAAAAGTATA

Downstream 100 bases:

>100_bases
TCAGGAGAGTTAGTGATGAGCGATCCAAAACAGCCAAAAACGATCAAGCTCTTGGGCTATGTCAAAATATATGGTGAGAT
CGAAGCAGTCACCGGCCTGC

Product: Csm2 family CRISPR-associated protein

Products: NA

Alternate protein names: Csm2 Family CRISPR-Associated Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MAGKEFDFIKELGELPKLDEVKKRLERVNTFSSASSEIKESLYLYAAAIAKQMSADVTPTQLRRYYSYIKSIELVNRDQK
DDAPQIIDKYKLSFLLPKIAGSSERKKLESLYDVMKVCLSNNNGGKIKTVADLRLFVEFFEAILDYHASIEKSVNHN

Sequences:

>Translated_157_residues
MAGKEFDFIKELGELPKLDEVKKRLERVNTFSSASSEIKESLYLYAAAIAKQMSADVTPTQLRRYYSYIKSIELVNRDQK
DDAPQIIDKYKLSFLLPKIAGSSERKKLESLYDVMKVCLSNNNGGKIKTVADLRLFVEFFEAILDYHASIEKSVNHN
>Mature_156_residues
AGKEFDFIKELGELPKLDEVKKRLERVNTFSSASSEIKESLYLYAAAIAKQMSADVTPTQLRRYYSYIKSIELVNRDQKD
DAPQIIDKYKLSFLLPKIAGSSERKKLESLYDVMKVCLSNNNGGKIKTVADLRLFVEFFEAILDYHASIEKSVNHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17964; Mature: 17833

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKEFDFIKELGELPKLDEVKKRLERVNTFSSASSEIKESLYLYAAAIAKQMSADVTPT
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QLRRYYSYIKSIELVNRDQKDDAPQIIDKYKLSFLLPKIAGSSERKKLESLYDVMKVCLS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
NNNGGKIKTVADLRLFVEFFEAILDYHASIEKSVNHN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGKEFDFIKELGELPKLDEVKKRLERVNTFSSASSEIKESLYLYAAAIAKQMSADVTPT
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QLRRYYSYIKSIELVNRDQKDDAPQIIDKYKLSFLLPKIAGSSERKKLESLYDVMKVCLS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
NNNGGKIKTVADLRLFVEFFEAILDYHASIEKSVNHN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA