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The map label for this gene is fccA [H]

Identifier: 193211685

GI number: 193211685

Start: 11807

End: 12151

Strand: Direct

Name: fccA [H]

Synonym: Cpar_0009

Alternate gene names: 193211685

Gene position: 11807-12151 (Clockwise)

Preceding gene: 193211680

Following gene: 193211686

Centisome position: 0.52

GC content: 55.36

Gene sequence:

>345_bases
ATGAGGCTTACATCGAAAGGCGTAGTGATTGCGGCGCTTGCCGTATTGCCATTGTTGCCTGCCGGAATGGCGCGGGCTCA
GGCTCCTGAGCAGTCAAAGAGCATTCCGCGTGGTGAGATCTTGTCGCTCTCCTGCGCCGGATGTCATGGCACCGATGGTA
AAAGCGAAAGCATCATTCCGACGATCTACGGCAGGTCGGCTGAGTACATCGAATCCGCGCTGCTCGATTTCAAGTCTGGC
GCTCGCCCGTCTACCGTGATGGGGCGTCATGCCAAAGGGTATTCCGACGAGGAGATTCACCAGATCGCCGAGTACTTTGG
ATCGCTTTCAACCATGAACAATTAA

Upstream 100 bases:

>100_bases
TGTATGCTTCAGCTCGTATTTTTTTCTTACGCTATTTCCTATGGAATAGCTGATAAACCCGTCCCTCATTTTTTGCCCAT
GTAAACACGGAGGATCCATT

Downstream 100 bases:

>100_bases
TCCGGGGAGGCAGCTATGAGTATTTCACGACGCGATTTCAATAAACTGCTTCTTTCCGGTGCGGCCGGTTCCATGTTTGG
CCTGTTGGGTGCCAGTGGCA

Product: cytochrome c class I

Products: NA

Alternate protein names: FCSD; FC; Flavocytochrome c cytochrome subunit [H]

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MRLTSKGVVIAALAVLPLLPAGMARAQAPEQSKSIPRGEILSLSCAGCHGTDGKSESIIPTIYGRSAEYIESALLDFKSG
ARPSTVMGRHAKGYSDEEIHQIAEYFGSLSTMNN

Sequences:

>Translated_114_residues
MRLTSKGVVIAALAVLPLLPAGMARAQAPEQSKSIPRGEILSLSCAGCHGTDGKSESIIPTIYGRSAEYIESALLDFKSG
ARPSTVMGRHAKGYSDEEIHQIAEYFGSLSTMNN
>Mature_114_residues
MRLTSKGVVIAALAVLPLLPAGMARAQAPEQSKSIPRGEILSLSCAGCHGTDGKSESIIPTIYGRSAEYIESALLDFKSG
ARPSTVMGRHAKGYSDEEIHQIAEYFGSLSTMNN

Specific function: Monoheme cytochrome that function as the electron transport subunit of sulfide dehydrogenase [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12082; Mature: 12082

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTSKGVVIAALAVLPLLPAGMARAQAPEQSKSIPRGEILSLSCAGCHGTDGKSESIIP
CCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCH
TIYGRSAEYIESALLDFKSGARPSTVMGRHAKGYSDEEIHQIAEYFGSLSTMNN
HHCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLTSKGVVIAALAVLPLLPAGMARAQAPEQSKSIPRGEILSLSCAGCHGTDGKSESIIP
CCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCH
TIYGRSAEYIESALLDFKSGARPSTVMGRHAKGYSDEEIHQIAEYFGSLSTMNN
HHCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2161842 [H]