| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214477
Identifier: 193214477
GI number: 193214477
Start: 895090
End: 896232
Strand: Direct
Name: 193214477
Synonym: Ctha_0760
Alternate gene names: NA
Gene position: 895090-896232 (Clockwise)
Preceding gene: 193214476
Following gene: 193214478
Centisome position: 27.18
GC content: 44.53
Gene sequence:
>1143_bases ATGTTTGCAAGAAAAATTTTCATGGTAATAGGCATGGTTCTATGCCTTTACGCTACCAGTTTCGCCCAAAAAGGCACGAT TACGGGCGGCTTGGTTGGCGATCCCAGGGTTATTTATTTAGCCGACATTATAAAAATCGGCGATCAAGTCAGCTTAGGTG GAACTGCAAAAGATATCTTTCGTGTGACCATCACCAACAACACAACAAACGAACCGCTTGGCCTTGTGCTTGAATTCTAC AAAGACGGTTCGCTCATCGCACATGGCGAATCCAAGAAGTTGGTTTATAAAAAAACATTCACCATTACAAATAATAACAT CAAACAGAGCCCTTATAGTCTTAGCAATTTTGAATTTGACAAACAGGCTCTGGAGAACATAACCGGTATTAGTTTTGAGA GCAGCGGTCCTGGAAATGTTAATATTCCAACGACATTGCCTTCTGGCATTTACATGTTTAAACTTTCGCTGAAAGATCAA AACGCCATGGAGGTGTCTGGCAGCCTTTGCACAATAGTTCTTACGATCACGAACCCAACGGGCTATATCTCACTGCTGGG TCCCGGAAATCCGGTTTCGTTTAATGAGCCCCAAGTCATTAATAACGCGTTCCCAACCTTTTCATGGCAAGGCGATGCCC AAGAATACATTATTGAAGTCTACGAACGCGTGAAAGGTCGCCAGGAGTCCTTTACTGAAGTTCTCGGCAACAACCGGCAC TTTTTCAAAGAGCATGTTCTTGGACAATCAATCCAATTTGATGGCGCGAGCGGGACACGCCCATTTGTGTCAGGAAATAC TTACTTCTGGCGCGTGACTTCCGTTGTAGAAGTTGGTGGCCGCGACAACCCAACCAAAACTTGGTCTGAGCCCTTCTTCT TCACCTACGTTGAGCCCGGCGCCAACCTTGATAATGGCGGCGTTGCCTCAGATGACCAACTCATGGCTATGGTAAAAGAC ATGCTGGGAGCACTGGGTATTGATCCCGTTTGGTTAAGAAGCAAAGAAACTACTTTCATTTCATTTGAGGGAAAAGTTTT CTTTAATGACTCCGAAAAGCCACAGAACTACTCGAACAACACGAACTTAAACGACTTGGTTGAAGCGCTTCGTCAGCTCC TCAAAAATAAAGGTGCATATTAA
Upstream 100 bases:
>100_bases AGCTTACGTGACAACTGTCACATGAAAGCGCCGCCGTTAATAAGTATTTTAAATAATAAATTTCAAGCTTTTTCAATTTT TACCTGTATAGGGGGAAAAA
Downstream 100 bases:
>100_bases TAAACTGTCTGTATTTCAACTGAAAACAAAGAAACAGGTTAAACCCAAAATTGAAGAAATCATGAAAAGAATTATTCCGA TAATCTTGTTTCTGGTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MFARKIFMVIGMVLCLYATSFAQKGTITGGLVGDPRVIYLADIIKIGDQVSLGGTAKDIFRVTITNNTTNEPLGLVLEFY KDGSLIAHGESKKLVYKKTFTITNNNIKQSPYSLSNFEFDKQALENITGISFESSGPGNVNIPTTLPSGIYMFKLSLKDQ NAMEVSGSLCTIVLTITNPTGYISLLGPGNPVSFNEPQVINNAFPTFSWQGDAQEYIIEVYERVKGRQESFTEVLGNNRH FFKEHVLGQSIQFDGASGTRPFVSGNTYFWRVTSVVEVGGRDNPTKTWSEPFFFTYVEPGANLDNGGVASDDQLMAMVKD MLGALGIDPVWLRSKETTFISFEGKVFFNDSEKPQNYSNNTNLNDLVEALRQLLKNKGAY
Sequences:
>Translated_380_residues MFARKIFMVIGMVLCLYATSFAQKGTITGGLVGDPRVIYLADIIKIGDQVSLGGTAKDIFRVTITNNTTNEPLGLVLEFY KDGSLIAHGESKKLVYKKTFTITNNNIKQSPYSLSNFEFDKQALENITGISFESSGPGNVNIPTTLPSGIYMFKLSLKDQ NAMEVSGSLCTIVLTITNPTGYISLLGPGNPVSFNEPQVINNAFPTFSWQGDAQEYIIEVYERVKGRQESFTEVLGNNRH FFKEHVLGQSIQFDGASGTRPFVSGNTYFWRVTSVVEVGGRDNPTKTWSEPFFFTYVEPGANLDNGGVASDDQLMAMVKD MLGALGIDPVWLRSKETTFISFEGKVFFNDSEKPQNYSNNTNLNDLVEALRQLLKNKGAY >Mature_380_residues MFARKIFMVIGMVLCLYATSFAQKGTITGGLVGDPRVIYLADIIKIGDQVSLGGTAKDIFRVTITNNTTNEPLGLVLEFY KDGSLIAHGESKKLVYKKTFTITNNNIKQSPYSLSNFEFDKQALENITGISFESSGPGNVNIPTTLPSGIYMFKLSLKDQ NAMEVSGSLCTIVLTITNPTGYISLLGPGNPVSFNEPQVINNAFPTFSWQGDAQEYIIEVYERVKGRQESFTEVLGNNRH FFKEHVLGQSIQFDGASGTRPFVSGNTYFWRVTSVVEVGGRDNPTKTWSEPFFFTYVEPGANLDNGGVASDDQLMAMVKD MLGALGIDPVWLRSKETTFISFEGKVFFNDSEKPQNYSNNTNLNDLVEALRQLLKNKGAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42026; Mature: 42026
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARKIFMVIGMVLCLYATSFAQKGTITGGLVGDPRVIYLADIIKIGDQVSLGGTAKDIF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCCEEECCCCCCEEE RVTITNNTTNEPLGLVLEFYKDGSLIAHGESKKLVYKKTFTITNNNIKQSPYSLSNFEFD EEEEECCCCCCCHHHHEEEECCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCHH KQALENITGISFESSGPGNVNIPTTLPSGIYMFKLSLKDQNAMEVSGSLCTIVLTITNPT HHHHHHHCCCEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEECCCEEEEEEEEECCC GYISLLGPGNPVSFNEPQVINNAFPTFSWQGDAQEYIIEVYERVKGRQESFTEVLGNNRH CEEEEECCCCCCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCH FFKEHVLGQSIQFDGASGTRPFVSGNTYFWRVTSVVEVGGRDNPTKTWSEPFFFTYVEPG HHHHHHCCCCEEECCCCCCCCEECCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCC ANLDNGGVASDDQLMAMVKDMLGALGIDPVWLRSKETTFISFEGKVFFNDSEKPQNYSNN CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECEEEECCCCCCCCCCCC TNLNDLVEALRQLLKNKGAY CCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFARKIFMVIGMVLCLYATSFAQKGTITGGLVGDPRVIYLADIIKIGDQVSLGGTAKDIF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCCEEECCCCCCEEE RVTITNNTTNEPLGLVLEFYKDGSLIAHGESKKLVYKKTFTITNNNIKQSPYSLSNFEFD EEEEECCCCCCCHHHHEEEECCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCHH KQALENITGISFESSGPGNVNIPTTLPSGIYMFKLSLKDQNAMEVSGSLCTIVLTITNPT HHHHHHHCCCEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEECCCEEEEEEEEECCC GYISLLGPGNPVSFNEPQVINNAFPTFSWQGDAQEYIIEVYERVKGRQESFTEVLGNNRH CEEEEECCCCCCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCH FFKEHVLGQSIQFDGASGTRPFVSGNTYFWRVTSVVEVGGRDNPTKTWSEPFFFTYVEPG HHHHHHCCCCEEECCCCCCCCEECCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCC ANLDNGGVASDDQLMAMVKDMLGALGIDPVWLRSKETTFISFEGKVFFNDSEKPQNYSNN CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECEEEECCCCCCCCCCCC TNLNDLVEALRQLLKNKGAY CCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA