| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214417
Identifier: 193214417
GI number: 193214417
Start: 818586
End: 819149
Strand: Direct
Name: 193214417
Synonym: Ctha_0700
Alternate gene names: NA
Gene position: 818586-819149 (Clockwise)
Preceding gene: 193214416
Following gene: 193214418
Centisome position: 24.85
GC content: 48.76
Gene sequence:
>564_bases ATGCGTTTGAGATTTTCCACAGCACTTGTAGCGATAGCTGCTATCGGCTTCTCCGGGATGCTCTTCTCGGGATGCTCCGG CTGTAGCAAAAAGGGGGACGATGCAGACCTTTTGAAGCCCGATTCGGCAGCTCAAGTCGACTACTTGAAGCAGTACGAAA AAACGCTTGCCGAACCTGAACAACAGGATAAAGCTGGCTTAATCAAAAAGGAATACAGCACTCAAGAAGCTGCGCCACAA GCAGAAGAAACCCCAACAACAACAGCAAAAACAACCGTTCAAGACCCATACGATCTGATGGAACCTGTGCTTGATGACTT GGAAAACAAGCTCAGTCCAATTATCGATCGCGCTTGGCGTCAGCGCGGCTTGAAAGGCTACATCGAGTTCGACTTGCAAG TTGGCCCAGATGGCCGTGTGGCAAAGTTCAATCTTGTGCACAGCGATGTTGATGCTGCCACACTTTCAACGGTCAAAGCC ATTGCTCGTAGCACCCGATTTGAGCCGCATGATGAAAAGTATGGCAACATGAATACGCCACCTTTAAAGTTTTTGTCGCC TTAA
Upstream 100 bases:
>100_bases TAATTGTGTTCCATAAAAATTTGGATATCTTTACAATCTGTGTTTTATAAAAATTCTTTTCTGCTAACCAAAATTCGCTA ACCAAAAAATCTACCGACAC
Downstream 100 bases:
>100_bases TCTTATTGGGAAAAGTTCTCTTTTAAGCGTGAAAGAAACTTTCAATGGCTTACTTGCCGTTTGAGCTGAAGATATTTGCG CGAGCTCACCTCGTGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRLRFSTALVAIAAIGFSGMLFSGCSGCSKKGDDADLLKPDSAAQVDYLKQYEKTLAEPEQQDKAGLIKKEYSTQEAAPQ AEETPTTTAKTTVQDPYDLMEPVLDDLENKLSPIIDRAWRQRGLKGYIEFDLQVGPDGRVAKFNLVHSDVDAATLSTVKA IARSTRFEPHDEKYGNMNTPPLKFLSP
Sequences:
>Translated_187_residues MRLRFSTALVAIAAIGFSGMLFSGCSGCSKKGDDADLLKPDSAAQVDYLKQYEKTLAEPEQQDKAGLIKKEYSTQEAAPQ AEETPTTTAKTTVQDPYDLMEPVLDDLENKLSPIIDRAWRQRGLKGYIEFDLQVGPDGRVAKFNLVHSDVDAATLSTVKA IARSTRFEPHDEKYGNMNTPPLKFLSP >Mature_187_residues MRLRFSTALVAIAAIGFSGMLFSGCSGCSKKGDDADLLKPDSAAQVDYLKQYEKTLAEPEQQDKAGLIKKEYSTQEAAPQ AEETPTTTAKTTVQDPYDLMEPVLDDLENKLSPIIDRAWRQRGLKGYIEFDLQVGPDGRVAKFNLVHSDVDAATLSTVKA IARSTRFEPHDEKYGNMNTPPLKFLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20615; Mature: 20615
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRFSTALVAIAAIGFSGMLFSGCSGCSKKGDDADLLKPDSAAQVDYLKQYEKTLAEPE CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC QQDKAGLIKKEYSTQEAAPQAEETPTTTAKTTVQDPYDLMEPVLDDLENKLSPIIDRAWR HHHHHCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QRGLKGYIEFDLQVGPDGRVAKFNLVHSDVDAATLSTVKAIARSTRFEPHDEKYGNMNTP HCCCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCC PLKFLSP CCCCCCC >Mature Secondary Structure MRLRFSTALVAIAAIGFSGMLFSGCSGCSKKGDDADLLKPDSAAQVDYLKQYEKTLAEPE CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC QQDKAGLIKKEYSTQEAAPQAEETPTTTAKTTVQDPYDLMEPVLDDLENKLSPIIDRAWR HHHHHCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QRGLKGYIEFDLQVGPDGRVAKFNLVHSDVDAATLSTVKAIARSTRFEPHDEKYGNMNTP HCCCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCC PLKFLSP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA