| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214374
Identifier: 193214374
GI number: 193214374
Start: 765743
End: 766096
Strand: Direct
Name: 193214374
Synonym: Ctha_0657
Alternate gene names: NA
Gene position: 765743-766096 (Clockwise)
Preceding gene: 193214373
Following gene: 193214376
Centisome position: 23.25
GC content: 36.16
Gene sequence:
>354_bases ATGAGCAAAATAGTTCAGGCTGTAAGAAAAATGGCAGCCAATGCTGAAAGCATTATCGAGCATAAACATGACGATCATAA ATTCTTTTTCACTTACATGGAAAAATATCTTTGGTCGCTCGAGTATGACACAAATGAAGACTATTACCTTCTACAATTTT ACCCCAATTTAGAGGAATTCATGCACTTCTTAGAAAATGGGCAAGCTCAACAGATCTCATCGATTTCAACGATTTGCTTC AGCACAAAACAGCTTGACTCTCAAGAAGCCTATGATTCTTTCAAAGACTTGTTCCAGCTATTGAAATCCAGAAAATACGA CTTCGACAAAGTGCTTGATGAAATTATTGGATAA
Upstream 100 bases:
>100_bases CAATTCAGTTCGCACCCTTTGAGATGAACGCGATGAAAGGTGCTTTTGGACGGGTTTTCTTATCATCCATTCGCAAGAAT TAAAATCGGAGATTTACTTT
Downstream 100 bases:
>100_bases GTCCTGACTTGTTTTCGAAGAAAGTGAGTCGAAGCGAAATCAACTGCGGCTTTTAGGAATAACGCAGCCACTTCAACATT TCCGTGAGTTTTGGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSKIVQAVRKMAANAESIIEHKHDDHKFFFTYMEKYLWSLEYDTNEDYYLLQFYPNLEEFMHFLENGQAQQISSISTICF STKQLDSQEAYDSFKDLFQLLKSRKYDFDKVLDEIIG
Sequences:
>Translated_117_residues MSKIVQAVRKMAANAESIIEHKHDDHKFFFTYMEKYLWSLEYDTNEDYYLLQFYPNLEEFMHFLENGQAQQISSISTICF STKQLDSQEAYDSFKDLFQLLKSRKYDFDKVLDEIIG >Mature_116_residues SKIVQAVRKMAANAESIIEHKHDDHKFFFTYMEKYLWSLEYDTNEDYYLLQFYPNLEEFMHFLENGQAQQISSISTICFS TKQLDSQEAYDSFKDLFQLLKSRKYDFDKVLDEIIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14036; Mature: 13905
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIVQAVRKMAANAESIIEHKHDDHKFFFTYMEKYLWSLEYDTNEDYYLLQFYPNLEEF CHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH MHFLENGQAQQISSISTICFSTKQLDSQEAYDSFKDLFQLLKSRKYDFDKVLDEIIG HHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure SKIVQAVRKMAANAESIIEHKHDDHKFFFTYMEKYLWSLEYDTNEDYYLLQFYPNLEEF HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH MHFLENGQAQQISSISTICFSTKQLDSQEAYDSFKDLFQLLKSRKYDFDKVLDEIIG HHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA