| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214343
Identifier: 193214343
GI number: 193214343
Start: 734158
End: 734934
Strand: Direct
Name: 193214343
Synonym: Ctha_0625
Alternate gene names: NA
Gene position: 734158-734934 (Clockwise)
Preceding gene: 193214342
Following gene: 193214344
Centisome position: 22.29
GC content: 47.1
Gene sequence:
>777_bases ATGTTAAGACTTCGCGCTTGCGCTTTGTTTCTTTTGAGTTTTACGCTGCTCTTTTGCCTGTCGTGCCAGGCGGCGGCAAA AGAGCTTTCCTACGATTGGCCGTTTTCTGCCTCGCCGCAGCAGGTAATTGACTCGCTTCAAACCCAACACGCCGCCGATC TGCCGGATTCGATCGCCTACGAACATCATTTAATTTTGGCAAAAGCGCATTATTTCAATGCGTTTCAGGAAAATCGCCCC GACGAGACCAAGCAGGCGGATTTGCAAGCTGCACATGCCGCCATTCAAAATGCAATGGCCTATCATAAAACGCCGACTGC TCGTGCATTTGAATGCTTAATCATGTTGGAAGAAAATCACTTTCTTTCGCTAAAAGATGCTTCGCTCAATTTCGATATGT GCAAAAAAGAATTGGAAGATATTCTCCGAACCGACGCAATGGATTTTATTGCCAACATCGCCTATGGGCAGCTTGCCTAC GAAGTCCGTCAAATTCAAGGCTTTCGGCGATTTCTCGCCAAAATTTTTTATACACCACTCGCTGATGATGTAAACTACGA AACCGCGCTGCTCTACTTTTTGCAAGCCAAATATCTTCAGCCCTCGCCAGTGGTTTTTTATCAGCTTGCGCGGGCGTATT TCGCGCTCGGCAATCATCGCGACGCGCTGCTTTCCATCAAAACATGCGTTGCAACCACACCCGAACGGCCTTACATCGAT TTGTATTATCAGCATTTAGCCGAGCAAGCACAAAACACTTACAACACCAACCACTAA
Upstream 100 bases:
>100_bases CGTGCGACTGTCTTTCAGCGAATTGCTTCCGCTGTTTTATCGCTCGACGCAAGATTTACTTGCCCAAATTGACTCGTTCT CAAACAACGCTTAAAGAAAA
Downstream 100 bases:
>100_bases CGCTCGCAAGCCCGTCTTATATAATATCATGCAGCTTTTGTTACGCGCCCTTGACTATGTTTTTTTGCTTCGCCCCACCC TGATGTTTCCGGTTTGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MLRLRACALFLLSFTLLFCLSCQAAAKELSYDWPFSASPQQVIDSLQTQHAADLPDSIAYEHHLILAKAHYFNAFQENRP DETKQADLQAAHAAIQNAMAYHKTPTARAFECLIMLEENHFLSLKDASLNFDMCKKELEDILRTDAMDFIANIAYGQLAY EVRQIQGFRRFLAKIFYTPLADDVNYETALLYFLQAKYLQPSPVVFYQLARAYFALGNHRDALLSIKTCVATTPERPYID LYYQHLAEQAQNTYNTNH
Sequences:
>Translated_258_residues MLRLRACALFLLSFTLLFCLSCQAAAKELSYDWPFSASPQQVIDSLQTQHAADLPDSIAYEHHLILAKAHYFNAFQENRP DETKQADLQAAHAAIQNAMAYHKTPTARAFECLIMLEENHFLSLKDASLNFDMCKKELEDILRTDAMDFIANIAYGQLAY EVRQIQGFRRFLAKIFYTPLADDVNYETALLYFLQAKYLQPSPVVFYQLARAYFALGNHRDALLSIKTCVATTPERPYID LYYQHLAEQAQNTYNTNH >Mature_258_residues MLRLRACALFLLSFTLLFCLSCQAAAKELSYDWPFSASPQQVIDSLQTQHAADLPDSIAYEHHLILAKAHYFNAFQENRP DETKQADLQAAHAAIQNAMAYHKTPTARAFECLIMLEENHFLSLKDASLNFDMCKKELEDILRTDAMDFIANIAYGQLAY EVRQIQGFRRFLAKIFYTPLADDVNYETALLYFLQAKYLQPSPVVFYQLARAYFALGNHRDALLSIKTCVATTPERPYID LYYQHLAEQAQNTYNTNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29627; Mature: 29627
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLRACALFLLSFTLLFCLSCQAAAKELSYDWPFSASPQQVIDSLQTQHAADLPDSIAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH EHHLILAKAHYFNAFQENRPDETKQADLQAAHAAIQNAMAYHKTPTARAFECLIMLEENH HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEECCC FLSLKDASLNFDMCKKELEDILRTDAMDFIANIAYGQLAYEVRQIQGFRRFLAKIFYTPL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ADDVNYETALLYFLQAKYLQPSPVVFYQLARAYFALGNHRDALLSIKTCVATTPERPYID CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH LYYQHLAEQAQNTYNTNH HHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLRLRACALFLLSFTLLFCLSCQAAAKELSYDWPFSASPQQVIDSLQTQHAADLPDSIAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH EHHLILAKAHYFNAFQENRPDETKQADLQAAHAAIQNAMAYHKTPTARAFECLIMLEENH HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEECCC FLSLKDASLNFDMCKKELEDILRTDAMDFIANIAYGQLAYEVRQIQGFRRFLAKIFYTPL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ADDVNYETALLYFLQAKYLQPSPVVFYQLARAYFALGNHRDALLSIKTCVATTPERPYID CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH LYYQHLAEQAQNTYNTNH HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA