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The map label for this gene is pyrF [H]

Identifier: 193214262

GI number: 193214262

Start: 641725

End: 642555

Strand: Direct

Name: pyrF [H]

Synonym: Ctha_0543

Alternate gene names: 193214262

Gene position: 641725-642555 (Clockwise)

Preceding gene: 193214261

Following gene: 193214263

Centisome position: 19.48

GC content: 44.04

Gene sequence:

>831_bases
ATGTTCAAATCGCGGTTAAACCAACTTATTGAGTCAAAAAACTCGCTTCTTTGTGTCGGCTTGGACGCAGACCCTGACAA
AATTCCATCAGTTTTTCACCAACACGACAGTCCCGTTGTCGCATTTAACGCGGCCATCATTGAGGCCACATCAGAATTGG
CTATTGCTTATAAGCCAAACATTGCATTTTATGAATCGCGTGGCATCCGCGGTTTCAAAGATTTGGAGGAAACCCTGCTA
CTCATTCCTAAGACTTGCTTGACCATCGCGGATGGCAAGCGTGGCGATATTGGAAATACAAGCCAAATGTATGCAAAAGC
GTTTTATGAGCATTGGAATTTTGACGCATCTACCGTTGCGCCTTACATGGGACACGACTCTCTTTTGCCATTTTTTGAGT
ATCAGGAAAAGCTCACTTTTGTTTTATGCTTGACTTCTAATAACGGTTCTGCTGACTTCGAAGAGCAACGGCTCGCAAAT
GGGAAAAAGCTATATGAAGCGGTGCTTGAAAAGGTTTTAGCATGGAATAAAGCAGGAAACATCGGCATCGTTGTTGGCGC
AACGAAGCCTGAACAGCTTGCAGAAATTCGCCAAAAAGCACCTGAGATTGTCATTCTCATTCCAGGCATTGGTGCCCAAG
GTGGATCGTTAGAGGAAACCATTCGCTATGGCACGGATAAAAACCAGGAATCAGCCATTGTGGTTTCCGGCAGAAAAATT
ATTTACCCTGACGGTAAATTCACGTCCATCGATGAATTTCAGCGCGCTGTGAATGAGAGAGCAAAAGCAACGGTTTTGGA
AATGAGACAATACCTAAAAACTAACCTTTAG

Upstream 100 bases:

>100_bases
AAAAAGAGCGAATGACTCACTTGAAAGCTTAATTTTTTTGCTTAAATACAGTCGATGGCTTACGTTTAGAGGTTATGTAA
ACTTTGGAAAAAACGCATGT

Downstream 100 bases:

>100_bases
AAGAAGGCCTTTTTAGTACCTTACATGAGTGGATGACTAAAGTCACAACTCTTCCCCCAAAAAAAATTAAATTCATCAGG
CAAGAGTGCTTTCACTCGTA

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MFKSRLNQLIESKNSLLCVGLDADPDKIPSVFHQHDSPVVAFNAAIIEATSELAIAYKPNIAFYESRGIRGFKDLEETLL
LIPKTCLTIADGKRGDIGNTSQMYAKAFYEHWNFDASTVAPYMGHDSLLPFFEYQEKLTFVLCLTSNNGSADFEEQRLAN
GKKLYEAVLEKVLAWNKAGNIGIVVGATKPEQLAEIRQKAPEIVILIPGIGAQGGSLEETIRYGTDKNQESAIVVSGRKI
IYPDGKFTSIDEFQRAVNERAKATVLEMRQYLKTNL

Sequences:

>Translated_276_residues
MFKSRLNQLIESKNSLLCVGLDADPDKIPSVFHQHDSPVVAFNAAIIEATSELAIAYKPNIAFYESRGIRGFKDLEETLL
LIPKTCLTIADGKRGDIGNTSQMYAKAFYEHWNFDASTVAPYMGHDSLLPFFEYQEKLTFVLCLTSNNGSADFEEQRLAN
GKKLYEAVLEKVLAWNKAGNIGIVVGATKPEQLAEIRQKAPEIVILIPGIGAQGGSLEETIRYGTDKNQESAIVVSGRKI
IYPDGKFTSIDEFQRAVNERAKATVLEMRQYLKTNL
>Mature_276_residues
MFKSRLNQLIESKNSLLCVGLDADPDKIPSVFHQHDSPVVAFNAAIIEATSELAIAYKPNIAFYESRGIRGFKDLEETLL
LIPKTCLTIADGKRGDIGNTSQMYAKAFYEHWNFDASTVAPYMGHDSLLPFFEYQEKLTFVLCLTSNNGSADFEEQRLAN
GKKLYEAVLEKVLAWNKAGNIGIVVGATKPEQLAEIRQKAPEIVILIPGIGAQGGSLEETIRYGTDKNQESAIVVSGRKI
IYPDGKFTSIDEFQRAVNERAKATVLEMRQYLKTNL

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 30671; Mature: 30671

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSRLNQLIESKNSLLCVGLDADPDKIPSVFHQHDSPVVAFNAAIIEATSELAIAYKPN
CCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEHHHEECCCCEEEEECCC
IAFYESRGIRGFKDLEETLLLIPKTCLTIADGKRGDIGNTSQMYAKAFYEHWNFDASTVA
EEEEECCCCCCHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHCC
PYMGHDSLLPFFEYQEKLTFVLCLTSNNGSADFEEQRLANGKKLYEAVLEKVLAWNKAGN
CCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCC
IGIVVGATKPEQLAEIRQKAPEIVILIPGIGAQGGSLEETIRYGTDKNQESAIVVSGRKI
EEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEEECCEE
IYPDGKFTSIDEFQRAVNERAKATVLEMRQYLKTNL
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKSRLNQLIESKNSLLCVGLDADPDKIPSVFHQHDSPVVAFNAAIIEATSELAIAYKPN
CCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEHHHEECCCCEEEEECCC
IAFYESRGIRGFKDLEETLLLIPKTCLTIADGKRGDIGNTSQMYAKAFYEHWNFDASTVA
EEEEECCCCCCHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHCC
PYMGHDSLLPFFEYQEKLTFVLCLTSNNGSADFEEQRLANGKKLYEAVLEKVLAWNKAGN
CCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCC
IGIVVGATKPEQLAEIRQKAPEIVILIPGIGAQGGSLEETIRYGTDKNQESAIVVSGRKI
EEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEEECCEE
IYPDGKFTSIDEFQRAVNERAKATVLEMRQYLKTNL
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA