Click here to switch to the map view.

The map label for this gene is malZ [C]

Identifier: 193214261

GI number: 193214261

Start: 640070

End: 641530

Strand: Direct

Name: malZ [C]

Synonym: Ctha_0542

Alternate gene names: 193214261

Gene position: 640070-641530 (Clockwise)

Preceding gene: 193214260

Following gene: 193214262

Centisome position: 19.43

GC content: 44.76

Gene sequence:

>1461_bases
ATGAGTAACGCAGTAAAATATCCACTCGTATTCGAGGTTAATGCGCACGTATGGCTTCGGGAACTTTCCCACAAAACAGG
CTCACCAGTAAGTTTATCCACCATTCCTCACTCCGAAATTCAAAAATGGGCAGACCAAAATATCAATGCTGTTTGGCTAA
TGGGCGTATGGACACGAAGCCCAAAAGGCAAAGAAGTTGCACTTCATCATGATGGACTTCACTTTGATTACACCAAAGCA
CTGCCAGGCTGGACAGAAAACGATATTGACGCCTCGCCATATTCCATTGTTGATTACAAAGTCTCGCCTGAGTTTGGTGG
AGAAAGTGCCTTGGCGCGGCTTCGCGAGCGACTTGCGGAATACAATATCAAATTGATTTTGGATTTTGTTCCAAATCATA
CAGCGCTCGATCATCCTTGGATTGCAAGCAAACCCGAATATTATGTTCAGGTTTCAAAAGAAGCCTATGAAAAAGCACCG
GATTTATTTTTTAGCCCAAACGAAAATCAATTCCTTGCCTACGGACGCGACCCTTATTTTCCACCTTGGACAGACACCGC
GCAGCTGAACTACGCCAATTCGGACTGCCGGAGTGCCATGCTTGCCACGCTCAAAGAGATTGCGTCGCAATGCGATGGCG
TTCGCTGCGATATGGCGATGCTGATGCTCAAAGAAATTTATAATGGCATTTGGGGGAACTTAACGGGAAAAATGCAAGAA
GAATTTTGGGAGCTGGCCATCCGCGAGATCAAAAGTCAATATCCGAATTTCCTGTTTATTGCTGAGGCTTATTGGGATAA
AGAATGGGAGCTTCAGCAACTTGGCTTTGACTTTATTTACGATAAGCGATTTTATGACCGATTAAAGTCGGGCGACATTC
AAGGGCTGAAAACGCACCTCAATGCAGACATGGCCTTTCAACAAAAACTGGTTCGTTTTATTGAAAATCACGACGAAGAA
CGCGCTGCAGTTAGCTTAAAAAATAATCACAAAGTGGCTGCCATGGTCACATTAACTTCGCCAGGAATGAGGCTCGTCCA
TCAAGGACAACAGGAAGGATTTAAAACTAAATTGCCCGTACAACTTGCCAATCCAAAGCAAGAACCGCAAAATGCTGACA
TTTACGGCTTCTATGAGCGATTGTTTAGGGTCATGCGGCAAACGCCCGTTACTCGCGGCGAATTTCATTTGATCGATTTA
AAAGAACACGACAACCCTGACGTGATCGCATTTGAACGCCGAAATGGTGTGAAAACCCGGCATTTCATCACAGTTGCAAA
CTTCAGCGATCGCCCAACCACGCTTAGCTTCAACACGGACGCATTCAGTAATATTTTTAGTTATGAGCATATTGAAGTTG
TCAGCACAGAGCTGCTTTGCAGCCCGCAGTTTGATATTTCTCCAGACAGTCTAACGGTTAGGCTTCGGCCACATGAAGGA
TTGCTTTTTGTAACCCATTAA

Upstream 100 bases:

>100_bases
TTGTAGTTTTAGAAGACATGTAATTTTTGCTGTTTGAAAAATAGATAGCGCGTTATCGATGCAATGAGCTTATTAACTTT
AAAACAGAAACTGTGACGAT

Downstream 100 bases:

>100_bases
AAATGGGTGTGGCAAAAATATTTAAAAATTACCGGCGCAAAACGATGACATTGCGCCGGATTTTCTTTTAAATCCCGATA
GTTTATTGGGTTATAAAAAG

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: 1,4-alpha-D-glucan glucanohydrolase [H]

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MSNAVKYPLVFEVNAHVWLRELSHKTGSPVSLSTIPHSEIQKWADQNINAVWLMGVWTRSPKGKEVALHHDGLHFDYTKA
LPGWTENDIDASPYSIVDYKVSPEFGGESALARLRERLAEYNIKLILDFVPNHTALDHPWIASKPEYYVQVSKEAYEKAP
DLFFSPNENQFLAYGRDPYFPPWTDTAQLNYANSDCRSAMLATLKEIASQCDGVRCDMAMLMLKEIYNGIWGNLTGKMQE
EFWELAIREIKSQYPNFLFIAEAYWDKEWELQQLGFDFIYDKRFYDRLKSGDIQGLKTHLNADMAFQQKLVRFIENHDEE
RAAVSLKNNHKVAAMVTLTSPGMRLVHQGQQEGFKTKLPVQLANPKQEPQNADIYGFYERLFRVMRQTPVTRGEFHLIDL
KEHDNPDVIAFERRNGVKTRHFITVANFSDRPTTLSFNTDAFSNIFSYEHIEVVSTELLCSPQFDISPDSLTVRLRPHEG
LLFVTH

Sequences:

>Translated_486_residues
MSNAVKYPLVFEVNAHVWLRELSHKTGSPVSLSTIPHSEIQKWADQNINAVWLMGVWTRSPKGKEVALHHDGLHFDYTKA
LPGWTENDIDASPYSIVDYKVSPEFGGESALARLRERLAEYNIKLILDFVPNHTALDHPWIASKPEYYVQVSKEAYEKAP
DLFFSPNENQFLAYGRDPYFPPWTDTAQLNYANSDCRSAMLATLKEIASQCDGVRCDMAMLMLKEIYNGIWGNLTGKMQE
EFWELAIREIKSQYPNFLFIAEAYWDKEWELQQLGFDFIYDKRFYDRLKSGDIQGLKTHLNADMAFQQKLVRFIENHDEE
RAAVSLKNNHKVAAMVTLTSPGMRLVHQGQQEGFKTKLPVQLANPKQEPQNADIYGFYERLFRVMRQTPVTRGEFHLIDL
KEHDNPDVIAFERRNGVKTRHFITVANFSDRPTTLSFNTDAFSNIFSYEHIEVVSTELLCSPQFDISPDSLTVRLRPHEG
LLFVTH
>Mature_485_residues
SNAVKYPLVFEVNAHVWLRELSHKTGSPVSLSTIPHSEIQKWADQNINAVWLMGVWTRSPKGKEVALHHDGLHFDYTKAL
PGWTENDIDASPYSIVDYKVSPEFGGESALARLRERLAEYNIKLILDFVPNHTALDHPWIASKPEYYVQVSKEAYEKAPD
LFFSPNENQFLAYGRDPYFPPWTDTAQLNYANSDCRSAMLATLKEIASQCDGVRCDMAMLMLKEIYNGIWGNLTGKMQEE
FWELAIREIKSQYPNFLFIAEAYWDKEWELQQLGFDFIYDKRFYDRLKSGDIQGLKTHLNADMAFQQKLVRFIENHDEER
AAVSLKNNHKVAAMVTLTSPGMRLVHQGQQEGFKTKLPVQLANPKQEPQNADIYGFYERLFRVMRQTPVTRGEFHLIDLK
EHDNPDVIAFERRNGVKTRHFITVANFSDRPTTLSFNTDAFSNIFSYEHIEVVSTELLCSPQFDISPDSLTVRLRPHEGL
LFVTH

Specific function: May Play A Role In Regulating The Intracellular Level Of Maltotriose. Cleaves Glucose From The Reducing End Of Maltotriose And Longer Maltodextrins With A Chain Length Of Up To 7 Glucose Units. [C]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 56124; Mature: 55993

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAVKYPLVFEVNAHVWLRELSHKTGSPVSLSTIPHSEIQKWADQNINAVWLMGVWTRS
CCCCEECCEEEEECHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCEEEEEEEEECC
PKGKEVALHHDGLHFDYTKALPGWTENDIDASPYSIVDYKVSPEFGGESALARLRERLAE
CCCCEEEEEECCCCEEHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
YNIKLILDFVPNHTALDHPWIASKPEYYVQVSKEAYEKAPDLFFSPNENQFLAYGRDPYF
CCEEEEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCEECCCCCCEEEECCCCCC
PPWTDTAQLNYANSDCRSAMLATLKEIASQCDGVRCDMAMLMLKEIYNGIWGNLTGKMQE
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
EFWELAIREIKSQYPNFLFIAEAYWDKEWELQQLGFDFIYDKRFYDRLKSGDIQGLKTHL
HHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCCHHEECHHHHHHHHCCCCHHHHHHC
NADMAFQQKLVRFIENHDEERAAVSLKNNHKVAAMVTLTSPGMRLVHQGQQEGFKTKLPV
CCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHCCHHCCCCEECCE
QLANPKQEPQNADIYGFYERLFRVMRQTPVTRGEFHLIDLKEHDNPDVIAFERRNGVKTR
EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEE
HFITVANFSDRPTTLSFNTDAFSNIFSYEHIEVVSTELLCSPQFDISPDSLTVRLRPHEG
EEEEEECCCCCCCEEEECCHHHHHHHCCCHHEEEEHHHEECCCCCCCCCCEEEEEECCCC
LLFVTH
EEEEEC
>Mature Secondary Structure 
SNAVKYPLVFEVNAHVWLRELSHKTGSPVSLSTIPHSEIQKWADQNINAVWLMGVWTRS
CCCEECCEEEEECHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCEEEEEEEEECC
PKGKEVALHHDGLHFDYTKALPGWTENDIDASPYSIVDYKVSPEFGGESALARLRERLAE
CCCCEEEEEECCCCEEHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
YNIKLILDFVPNHTALDHPWIASKPEYYVQVSKEAYEKAPDLFFSPNENQFLAYGRDPYF
CCEEEEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCEECCCCCCEEEECCCCCC
PPWTDTAQLNYANSDCRSAMLATLKEIASQCDGVRCDMAMLMLKEIYNGIWGNLTGKMQE
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
EFWELAIREIKSQYPNFLFIAEAYWDKEWELQQLGFDFIYDKRFYDRLKSGDIQGLKTHL
HHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCCHHEECHHHHHHHHCCCCHHHHHHC
NADMAFQQKLVRFIENHDEERAAVSLKNNHKVAAMVTLTSPGMRLVHQGQQEGFKTKLPV
CCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHCCHHCCCCEECCE
QLANPKQEPQNADIYGFYERLFRVMRQTPVTRGEFHLIDLKEHDNPDVIAFERRNGVKTR
EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEE
HFITVANFSDRPTTLSFNTDAFSNIFSYEHIEVVSTELLCSPQFDISPDSLTVRLRPHEG
EEEEEECCCCCCCEEEECCHHHHHHHCCCHHEEEEHHHEECCCCCCCCCCEEEEEECCCC
LLFVTH
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2455281 [H]