| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214203
Identifier: 193214203
GI number: 193214203
Start: 567152
End: 567619
Strand: Direct
Name: 193214203
Synonym: Ctha_0484
Alternate gene names: NA
Gene position: 567152-567619 (Clockwise)
Preceding gene: 193214202
Following gene: 193214204
Centisome position: 17.22
GC content: 49.36
Gene sequence:
>468_bases ATGAATGAAGTTATGGAAGAACGGCTTGCAGAAATGGAGCAGAGAAAAGAGCAACTCGAAGAGCTCATTAACCAACGACA GGCACAAATCAATCGGCGCGCTGCTACGCTGAAAAAAGACATTGAAGCACGCTTTCAACCGAAAGAAGTCATTCGCCAAT ATCCGCTGGCTTCAGCCGGAATGCTTTTTGGCATTGGCGTTGCAATTGGCGGCTGGCTCAAAAAAGATTCGCCTCAGCAC GCCGTCCATTCGATGGCCAGCACGCCTGCAGCACCACGCGCTGCACAGCCGCAACCTGCCCCAAATTATCATCATGCGCC GCCAAAACAGCAGAGCAAACTTTCTGGACTTGCGTCCGACTTGGCGTTTGATTTCCTCAATGCCATGAAAGAGGTTCTTG TCAGCTATGCCATCGAATACGCTTCTGAAAAATTCAAAGAGAAAGCTTCGCCCAAAAAAAACGGCTAA
Upstream 100 bases:
>100_bases ATTATTGCAAAAATGATCCGTGAGGGATTTGTACCTAACGAGCGAATACGTTCGTTTTGACATTTCTCTAAATTACAATG CTTGAACGAATCTAATACTC
Downstream 100 bases:
>100_bases GAAACCAAAATAAACCCCCAAACGTTAATGAAGGGAACTGTTTAACCGAATCAATCAGAACCGCGTATGCACACAACCGA AACACTTGAAAAAATACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNEVMEERLAEMEQRKEQLEELINQRQAQINRRAATLKKDIEARFQPKEVIRQYPLASAGMLFGIGVAIGGWLKKDSPQH AVHSMASTPAAPRAAQPQPAPNYHHAPPKQQSKLSGLASDLAFDFLNAMKEVLVSYAIEYASEKFKEKASPKKNG
Sequences:
>Translated_155_residues MNEVMEERLAEMEQRKEQLEELINQRQAQINRRAATLKKDIEARFQPKEVIRQYPLASAGMLFGIGVAIGGWLKKDSPQH AVHSMASTPAAPRAAQPQPAPNYHHAPPKQQSKLSGLASDLAFDFLNAMKEVLVSYAIEYASEKFKEKASPKKNG >Mature_155_residues MNEVMEERLAEMEQRKEQLEELINQRQAQINRRAATLKKDIEARFQPKEVIRQYPLASAGMLFGIGVAIGGWLKKDSPQH AVHSMASTPAAPRAAQPQPAPNYHHAPPKQQSKLSGLASDLAFDFLNAMKEVLVSYAIEYASEKFKEKASPKKNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17312; Mature: 17312
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVMEERLAEMEQRKEQLEELINQRQAQINRRAATLKKDIEARFQPKEVIRQYPLASAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHH MLFGIGVAIGGWLKKDSPQHAVHSMASTPAAPRAAQPQPAPNYHHAPPKQQSKLSGLASD HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LAFDFLNAMKEVLVSYAIEYASEKFKEKASPKKNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNEVMEERLAEMEQRKEQLEELINQRQAQINRRAATLKKDIEARFQPKEVIRQYPLASAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHH MLFGIGVAIGGWLKKDSPQHAVHSMASTPAAPRAAQPQPAPNYHHAPPKQQSKLSGLASD HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LAFDFLNAMKEVLVSYAIEYASEKFKEKASPKKNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA