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The map label for this gene is rimP

Identifier: 193214184

GI number: 193214184

Start: 544654

End: 545202

Strand: Direct

Name: rimP

Synonym: Ctha_0465

Alternate gene names: 193214184

Gene position: 544654-545202 (Clockwise)

Preceding gene: 193214183

Following gene: 193214185

Centisome position: 16.54

GC content: 42.62

Gene sequence:

>549_bases
ATGATGGATAGCAGGTTGAAGCTCATTCAAGATTGGCTATTGCAATTGCTCGCAGAGATGACCGTGAGCGATCCTGATGG
AAATGAACACGAGGTTTTCTTGGTGGACATAGAAGTTCATAGCAATAAAACCATTGATATTATAGAAGTTTTTGCGGATA
CTGACTCGGGAATTTCAGTTGAAAACTGCAAGTTTCTCAGCAAGCATATTTCAGCAGAGTTGGACGCAAGCGAGGAAATG
CAAGCGCTGCTTCCGCGACATTTTAAGTTGGTGGTATCGTCTCCAGGGCTGTCGAGGCCGCTTACGATGAATCGCCAGTA
TAAAAAAAATATTGGCCGGCTCATGCAAGTGACTTATCAAAACGCGGATGGAGAAATCAAAACAATTGATGGCCGGTTCA
TTTCTCTTGAGGAAGAGGCCGAAGCCAGCATCACATTAGACATCACAAAAATTCAAAAGAGCAAACCGAATGCGAAACCA
AAACCGCCTGAACTGGTCACCATTCCGTTTTCTCAAATTCAAAAAGCAATTGTTCAAGTTGAATTTTAA

Upstream 100 bases:

>100_bases
GGCATTTCTGTGTTATATTGCAGTTGATTAGTAATACCTTAAGTTAAAAGTGGGAAAAACCCCACTTTTTTTATTTACTC
AGACGCAGATTTTTAGTGCA

Downstream 100 bases:

>100_bases
TTTGTTGCCATAGTGCAAGTAAACTTTCTTGTTGTCAAAGGCAAGCAATTCATTTGAAAAGAGTTATGGCTAAAAAGCAA
GCAAAATTATCAGAGTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MMDSRLKLIQDWLLQLLAEMTVSDPDGNEHEVFLVDIEVHSNKTIDIIEVFADTDSGISVENCKFLSKHISAELDASEEM
QALLPRHFKLVVSSPGLSRPLTMNRQYKKNIGRLMQVTYQNADGEIKTIDGRFISLEEEAEASITLDITKIQKSKPNAKP
KPPELVTIPFSQIQKAIVQVEF

Sequences:

>Translated_182_residues
MMDSRLKLIQDWLLQLLAEMTVSDPDGNEHEVFLVDIEVHSNKTIDIIEVFADTDSGISVENCKFLSKHISAELDASEEM
QALLPRHFKLVVSSPGLSRPLTMNRQYKKNIGRLMQVTYQNADGEIKTIDGRFISLEEEAEASITLDITKIQKSKPNAKP
KPPELVTIPFSQIQKAIVQVEF
>Mature_182_residues
MMDSRLKLIQDWLLQLLAEMTVSDPDGNEHEVFLVDIEVHSNKTIDIIEVFADTDSGISVENCKFLSKHISAELDASEEM
QALLPRHFKLVVSSPGLSRPLTMNRQYKKNIGRLMQVTYQNADGEIKTIDGRFISLEEEAEASITLDITKIQKSKPNAKP
KPPELVTIPFSQIQKAIVQVEF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_CHLT3 (B3QUN0)

Other databases:

- EMBL:   CP001100
- RefSeq:   YP_001995383.1
- GeneID:   6421508
- GenomeReviews:   CP001100_GR
- KEGG:   cts:Ctha_0465
- HOGENOM:   HBG405620
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 20552; Mature: 20552

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDSRLKLIQDWLLQLLAEMTVSDPDGNEHEVFLVDIEVHSNKTIDIIEVFADTDSGISV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCH
ENCKFLSKHISAELDASEEMQALLPRHFKLVVSSPGLSRPLTMNRQYKKNIGRLMQVTYQ
HHHHHHHHHHCCCCCCHHHHHHHCCHHEEEEECCCCCCCCEECCHHHHHHHHHHHEEEEE
NADGEIKTIDGRFISLEEEAEASITLDITKIQKSKPNAKPKPPELVTIPFSQIQKAIVQV
CCCCCEEEECCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHEE
EF
CC
>Mature Secondary Structure
MMDSRLKLIQDWLLQLLAEMTVSDPDGNEHEVFLVDIEVHSNKTIDIIEVFADTDSGISV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCH
ENCKFLSKHISAELDASEEMQALLPRHFKLVVSSPGLSRPLTMNRQYKKNIGRLMQVTYQ
HHHHHHHHHHCCCCCCHHHHHHHCCHHEEEEECCCCCCCCEECCHHHHHHHHHHHEEEEE
NADGEIKTIDGRFISLEEEAEASITLDITKIQKSKPNAKPKPPELVTIPFSQIQKAIVQV
CCCCCEEEECCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHEE
EF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA