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The map label for this gene is 193214165

Identifier: 193214165

GI number: 193214165

Start: 525450

End: 527462

Strand: Direct

Name: 193214165

Synonym: Ctha_0446

Alternate gene names: NA

Gene position: 525450-527462 (Clockwise)

Preceding gene: 193214158

Following gene: 193214166

Centisome position: 15.95

GC content: 47.89

Gene sequence:

>2013_bases
ATGTCCTTAAAAAAAGTTTTATCCTCCCTGTCCAATCTGAATACCGACGCAACCTATCAAATCCCAACGCTTTGGAATAG
CAACACGATTTCCGTGCAAACGGTTAATCCGAAGACCTATTTCAGCGAGGCGATTCAGGAAATTCTTGCAACGCCGAAAC
AAGCATTTGCACCGGCCTTGCAAAACGACTGGACGAAATCGGCGGTAATCTATAATCTTTTTGCCCGCCTTACAACTGCT
TTCGATCATAACGGCGACGGTGCGCTTTCGCTTTCACCGCTCGAAAACGGTTTTTGCGAAACGGGCACATTTTTGAAAAC
CATCGCTCTTTTGCCCTACATCAAAAAATTGGGCGTCAACACGATTCATTTGCTCCCGATTACCGCCATCGGACACGATG
GCAACAAAGGCTCGCTCGGTTCGCCTTACGCCATCAAAAATCCTTACAAAATTGATGAAAATTTGTCCGAACCCACGCTC
GGCTTGGATGTTGAAACTGAGTTCAAAGCATTCGTGGAAGCCTGCCACCACTTGGGCATCCGCGTGGTGATGGAGTTCGT
GTTCCGCACCATGTCCAAAGATGGCGATTGGATTCAGGAGCATCCCGACTGGTTTTACTGGATTCAATCGGACATTGAAA
ATCGAGAGCCGGGCACAACCGACGAAAACGCTTACGGTAACCCGATTTTTTCCGATGAAAAATTAACGGAAATTAAGGAA
AAAGTTCGCCTTGAGGATTTTTCCAAACTGCCGCCGCCGGATGAAAAATATCGCTGCATGTTTACTGAAACGCCCGAAAG
CGTTGAAGCACAAAACGGGCGACTCATCGGGAAATTGCCCGACGGCAGCACGTGCAAAATTCCGGGCGCGTTTGCCGACT
GGCCGCCGGACGACATTCAGCCGCCTTGGAACGATGTTACTTATTTGAAAATGTATGACCATCCTGATTTTAATTATATC
GCCTACAACACGATTCGCATGTACGACGAGGCACTTAAGCAGCCTGCGTTTCGCAACAAGGCGCTTTGGGAACAAATCAT
CGGCATCATTCCGCATTATCAGGACGATTTCGACATCGATGGCGTGATGATCGACATGGGGCACGCCTTGCCGTTTAACC
TCAAGAAAAAATTGGTTGAAACCGCCCGCGAAAAAAAGCCGGACTTCGCGTTTTGGGACGAAAACTTCACCGTTTCGGAA
ACAAGCCGAAAAGAGGGTTACAACGCGGTGATGGGTTCGCTGCCGTTTGTCAGCCACAAGCTGCACGAGCTGAAATCCTA
TATTAATTATCTGGGCGAGATCGGCGTGAGCGTACCGTTTTTCGGGACGGCGGAAAATCACAATTTCCCGCGCAATGTTT
TCCGGTTTGGCTCTGGCGAAATCGGCCACCGATACGCGAAGTTTATTTGGGCGCTTGCGTCCGTTTTGCCCGCCGTGCCG
TTCATTCATTCCGGCATGGAAATTTGCGAATCCTTCCCAATCAACACCGGCCTTGATTTTACCGCCGATGAGCAAAAACA
TTTCCCTTCGGAAAAATTGCCGCTCTTTAACGAGCACGCCTACAACTGGCAAAACACGAACGGCATGGAGCCGCTCGGCG
CGTTTATCAAACAAATTCTTGACATTCGCCAGCGATTTTTAAGCGATTTGATGCGGGGCGAAAAAGGCACCATGAAAGTG
ATTGAAAGTGATAACCCGAGCGTTTTCGCGGTCGTGCGAACCGGCGGCGAACGGAAAATCGGCTTTATCGGGAATTACAA
TTTCAACGGCGAGGAGTATTTCAACTTAAAAATTGAAACGGAACGCACGGCGCTAACTGATTTATTTGCGGGCAAATCAC
TCGCTGTGGAAAATGGCAAAATTTCGGCATCGTTTTCCGCTGGCGAGTTCGCAATTTTTGAATTTTTAATTCCGAAAAGG
TTTTCTTACGAGCTTGAAGTCGAACTTCAATTTTCAGATTACTTAACCAAAAAAACTACTTGCTCATGTCTTTACTCATT
GTTGGCTCGTTAG

Upstream 100 bases:

>100_bases
CAAAATCCGTTCCGTCATATTCCAGCAACATTTTCAGATTTCGCCGACTTCGCGCTATATTGAAAGTCGACTGTTCACAA
CTATCCGGTAAAACCATCTT

Downstream 100 bases:

>100_bases
CTTTTGACAATATTGAAACGCCTTTTGGCAACTCCGACGATACGCTTGGCGGCTCGGCAACTTATGTGGCGATTTCCGCC
AGCTACTTCAGCGACGACAT

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: Alpha-Amylase Family Protein; Maltodextrin Glycosyltransferase; Alpha-Amylase; Alpha Amylase Domain-Containing Protein; Alpha Amylase Catalytic Sub Domain Protein; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Sub Domain; Alpha Amylase; Alpha Amylase Catalytic Domain-Containing Protein

Number of amino acids: Translated: 670; Mature: 669

Protein sequence:

>670_residues
MSLKKVLSSLSNLNTDATYQIPTLWNSNTISVQTVNPKTYFSEAIQEILATPKQAFAPALQNDWTKSAVIYNLFARLTTA
FDHNGDGALSLSPLENGFCETGTFLKTIALLPYIKKLGVNTIHLLPITAIGHDGNKGSLGSPYAIKNPYKIDENLSEPTL
GLDVETEFKAFVEACHHLGIRVVMEFVFRTMSKDGDWIQEHPDWFYWIQSDIENREPGTTDENAYGNPIFSDEKLTEIKE
KVRLEDFSKLPPPDEKYRCMFTETPESVEAQNGRLIGKLPDGSTCKIPGAFADWPPDDIQPPWNDVTYLKMYDHPDFNYI
AYNTIRMYDEALKQPAFRNKALWEQIIGIIPHYQDDFDIDGVMIDMGHALPFNLKKKLVETAREKKPDFAFWDENFTVSE
TSRKEGYNAVMGSLPFVSHKLHELKSYINYLGEIGVSVPFFGTAENHNFPRNVFRFGSGEIGHRYAKFIWALASVLPAVP
FIHSGMEICESFPINTGLDFTADEQKHFPSEKLPLFNEHAYNWQNTNGMEPLGAFIKQILDIRQRFLSDLMRGEKGTMKV
IESDNPSVFAVVRTGGERKIGFIGNYNFNGEEYFNLKIETERTALTDLFAGKSLAVENGKISASFSAGEFAIFEFLIPKR
FSYELEVELQFSDYLTKKTTCSCLYSLLAR

Sequences:

>Translated_670_residues
MSLKKVLSSLSNLNTDATYQIPTLWNSNTISVQTVNPKTYFSEAIQEILATPKQAFAPALQNDWTKSAVIYNLFARLTTA
FDHNGDGALSLSPLENGFCETGTFLKTIALLPYIKKLGVNTIHLLPITAIGHDGNKGSLGSPYAIKNPYKIDENLSEPTL
GLDVETEFKAFVEACHHLGIRVVMEFVFRTMSKDGDWIQEHPDWFYWIQSDIENREPGTTDENAYGNPIFSDEKLTEIKE
KVRLEDFSKLPPPDEKYRCMFTETPESVEAQNGRLIGKLPDGSTCKIPGAFADWPPDDIQPPWNDVTYLKMYDHPDFNYI
AYNTIRMYDEALKQPAFRNKALWEQIIGIIPHYQDDFDIDGVMIDMGHALPFNLKKKLVETAREKKPDFAFWDENFTVSE
TSRKEGYNAVMGSLPFVSHKLHELKSYINYLGEIGVSVPFFGTAENHNFPRNVFRFGSGEIGHRYAKFIWALASVLPAVP
FIHSGMEICESFPINTGLDFTADEQKHFPSEKLPLFNEHAYNWQNTNGMEPLGAFIKQILDIRQRFLSDLMRGEKGTMKV
IESDNPSVFAVVRTGGERKIGFIGNYNFNGEEYFNLKIETERTALTDLFAGKSLAVENGKISASFSAGEFAIFEFLIPKR
FSYELEVELQFSDYLTKKTTCSCLYSLLAR
>Mature_669_residues
SLKKVLSSLSNLNTDATYQIPTLWNSNTISVQTVNPKTYFSEAIQEILATPKQAFAPALQNDWTKSAVIYNLFARLTTAF
DHNGDGALSLSPLENGFCETGTFLKTIALLPYIKKLGVNTIHLLPITAIGHDGNKGSLGSPYAIKNPYKIDENLSEPTLG
LDVETEFKAFVEACHHLGIRVVMEFVFRTMSKDGDWIQEHPDWFYWIQSDIENREPGTTDENAYGNPIFSDEKLTEIKEK
VRLEDFSKLPPPDEKYRCMFTETPESVEAQNGRLIGKLPDGSTCKIPGAFADWPPDDIQPPWNDVTYLKMYDHPDFNYIA
YNTIRMYDEALKQPAFRNKALWEQIIGIIPHYQDDFDIDGVMIDMGHALPFNLKKKLVETAREKKPDFAFWDENFTVSET
SRKEGYNAVMGSLPFVSHKLHELKSYINYLGEIGVSVPFFGTAENHNFPRNVFRFGSGEIGHRYAKFIWALASVLPAVPF
IHSGMEICESFPINTGLDFTADEQKHFPSEKLPLFNEHAYNWQNTNGMEPLGAFIKQILDIRQRFLSDLMRGEKGTMKVI
ESDNPSVFAVVRTGGERKIGFIGNYNFNGEEYFNLKIETERTALTDLFAGKSLAVENGKISASFSAGEFAIFEFLIPKRF
SYELEVELQFSDYLTKKTTCSCLYSLLAR

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76018; Mature: 75887

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKKVLSSLSNLNTDATYQIPTLWNSNTISVQTVNPKTYFSEAIQEILATPKQAFAPAL
CCHHHHHHHHHHCCCCCEEEECEEECCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
QNDWTKSAVIYNLFARLTTAFDHNGDGALSLSPLENGFCETGTFLKTIALLPYIKKLGVN
HCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
TIHLLPITAIGHDGNKGSLGSPYAIKNPYKIDENLSEPTLGLDVETEFKAFVEACHHLGI
EEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RVVMEFVFRTMSKDGDWIQEHPDWFYWIQSDIENREPGTTDENAYGNPIFSDEKLTEIKE
HHHHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
KVRLEDFSKLPPPDEKYRCMFTETPESVEAQNGRLIGKLPDGSTCKIPGAFADWPPDDIQ
HHHHHHHHCCCCCCCCEEEEEECCCCCHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCC
PPWNDVTYLKMYDHPDFNYIAYNTIRMYDEALKQPAFRNKALWEQIIGIIPHYQDDFDID
CCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC
GVMIDMGHALPFNLKKKLVETAREKKPDFAFWDENFTVSETSRKEGYNAVMGSLPFVSHK
EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHCCHHHHHHCCCHHHHH
LHELKSYINYLGEIGVSVPFFGTAENHNFPRNVFRFGSGEIGHRYAKFIWALASVLPAVP
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FIHSGMEICESFPINTGLDFTADEQKHFPSEKLPLFNEHAYNWQNTNGMEPLGAFIKQIL
HHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DIRQRFLSDLMRGEKGTMKVIESDNPSVFAVVRTGGERKIGFIGNYNFNGEEYFNLKIET
HHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEC
ERTALTDLFAGKSLAVENGKISASFSAGEFAIFEFLIPKRFSYELEVELQFSDYLTKKTT
CHHHHHHHHCCCEEEEECCEEEEECCCCCHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHH
CSCLYSLLAR
HHHHHHHHCC
>Mature Secondary Structure 
SLKKVLSSLSNLNTDATYQIPTLWNSNTISVQTVNPKTYFSEAIQEILATPKQAFAPAL
CHHHHHHHHHHCCCCCEEEECEEECCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
QNDWTKSAVIYNLFARLTTAFDHNGDGALSLSPLENGFCETGTFLKTIALLPYIKKLGVN
HCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
TIHLLPITAIGHDGNKGSLGSPYAIKNPYKIDENLSEPTLGLDVETEFKAFVEACHHLGI
EEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RVVMEFVFRTMSKDGDWIQEHPDWFYWIQSDIENREPGTTDENAYGNPIFSDEKLTEIKE
HHHHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
KVRLEDFSKLPPPDEKYRCMFTETPESVEAQNGRLIGKLPDGSTCKIPGAFADWPPDDIQ
HHHHHHHHCCCCCCCCEEEEEECCCCCHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCC
PPWNDVTYLKMYDHPDFNYIAYNTIRMYDEALKQPAFRNKALWEQIIGIIPHYQDDFDID
CCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC
GVMIDMGHALPFNLKKKLVETAREKKPDFAFWDENFTVSETSRKEGYNAVMGSLPFVSHK
EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHCCHHHHHHCCCHHHHH
LHELKSYINYLGEIGVSVPFFGTAENHNFPRNVFRFGSGEIGHRYAKFIWALASVLPAVP
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FIHSGMEICESFPINTGLDFTADEQKHFPSEKLPLFNEHAYNWQNTNGMEPLGAFIKQIL
HHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DIRQRFLSDLMRGEKGTMKVIESDNPSVFAVVRTGGERKIGFIGNYNFNGEEYFNLKIET
HHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEC
ERTALTDLFAGKSLAVENGKISASFSAGEFAIFEFLIPKRFSYELEVELQFSDYLTKKTT
CHHHHHHHHCCCEEEEECCEEEEECCCCCHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHH
CSCLYSLLAR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA