| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214157
Identifier: 193214157
GI number: 193214157
Start: 512998
End: 514206
Strand: Direct
Name: 193214157
Synonym: Ctha_0438
Alternate gene names: NA
Gene position: 512998-514206 (Clockwise)
Preceding gene: 193214156
Following gene: 193214158
Centisome position: 15.58
GC content: 44.5
Gene sequence:
>1209_bases ATGGCATGGATAAGACCGAAAACGATTACCGGCCCGCCGGCAGAAGGTGAGCGTTACCTCAGACGAGAGTATATCAACAG CGGGTTTTGGCATCACATAAAAAGCGGCGCGCATATTGTTTTCTCAGCGCCCCGCCGTGTGGGCAAAACCTCGATTATGA AGGATTTGGCGAAAAATCCGCCCGAAGGCATTCTTGCGTTTTATGACATCATTGAATCCGATAAGACGCAAAAAGATCTT TTCAAGCGGCTGTTCAATCTTTTGCTTGAAAGGACAAAAACACATGAAAGACTTTTTGAACGCATTCGTCAATATTTGAA GGAAATAAAAATCGGCGGCGCTTCTGTAACTGGAGAAGCCGACTCAATCACAGGCGGGATTAATTTTGACAAAGTTGAAC TTGATTACAAAAATGAGTTACTTCGCTTAATTGAGCATCTTGGCAAAGAAAAAGTCCGCATTGTTTTTCTCTTGGACGAA TTTCCCGAAGTAATTCGTTCCATAGAACTTAGTGAGGGACAGCAGACGGCAATTGATACCCTGCACACGCTACGAGAAAT TCGGCAGCACGAAAAGTTCAAAAACTTCACCTTCGTCTTTGCCGGCTCTATCGGGATTCATCATGTGGTGGCTTCTTTGG AGAGACCCGCGCTAATCAATGATCTTCATCCCATTCATGTTGAACAACTCACGAATGATGAGGCGCACGAACTCTTGGCG CAACTCCTCGACGGCGCCACCATGCAAATCGGCGATGACAAAAAAGCGTATTTCCTGCGAAAAATTGACCATCGGCTGCC CTATTACATTCAATTGATGGTTGAAAAGTGCGACGAAATTTTGAACAAAGCAGGCCGCGACGTTTTAACAAACCATGACA TTGACGCGGCGTTTGAAATGATCATCAAAGAAGGCCGAAACTTTGACGATTGGGAATCGCGCTTGAAAAGATACGTTCAG CGCGAAGATGCGAAATATTGCATCGGCATTCTCACCCGTTGCGCTCATAGCGAACCGTATTCTATTCAGGAAGCTTACAA TTATTCCAAGAAGGATGTTCCTGCCGCGCCATATAAGCAACTTTTAGACAACGTGCTGATAAAAGACGGCTACCTTGTTG AAGAAAATCGTAGCTACCGTTTCCTTTCGCCCTTTTTGAAAGAATGGTGGAAACATCGTCACCCGAAATTTGAAATTGAA GATTTATAA
Upstream 100 bases:
>100_bases ATGAGATGACAATGATTTTGTTGTTAAAAGTTTTTGACAACAAACTTGTTGTCATTTATATTTGACAATAATTTTGTTGT CAAAACAAAAGGAGGGCAAA
Downstream 100 bases:
>100_bases CTAAGCGCATAATCTATTTAAACAAACAAATGAGTGCCGTCCTGTGCCGGTTTTTTCCAATGCGGAAAAAGATCAATCGC TGAATAGCAAACGGCGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MAWIRPKTITGPPAEGERYLRREYINSGFWHHIKSGAHIVFSAPRRVGKTSIMKDLAKNPPEGILAFYDIIESDKTQKDL FKRLFNLLLERTKTHERLFERIRQYLKEIKIGGASVTGEADSITGGINFDKVELDYKNELLRLIEHLGKEKVRIVFLLDE FPEVIRSIELSEGQQTAIDTLHTLREIRQHEKFKNFTFVFAGSIGIHHVVASLERPALINDLHPIHVEQLTNDEAHELLA QLLDGATMQIGDDKKAYFLRKIDHRLPYYIQLMVEKCDEILNKAGRDVLTNHDIDAAFEMIIKEGRNFDDWESRLKRYVQ REDAKYCIGILTRCAHSEPYSIQEAYNYSKKDVPAAPYKQLLDNVLIKDGYLVEENRSYRFLSPFLKEWWKHRHPKFEIE DL
Sequences:
>Translated_402_residues MAWIRPKTITGPPAEGERYLRREYINSGFWHHIKSGAHIVFSAPRRVGKTSIMKDLAKNPPEGILAFYDIIESDKTQKDL FKRLFNLLLERTKTHERLFERIRQYLKEIKIGGASVTGEADSITGGINFDKVELDYKNELLRLIEHLGKEKVRIVFLLDE FPEVIRSIELSEGQQTAIDTLHTLREIRQHEKFKNFTFVFAGSIGIHHVVASLERPALINDLHPIHVEQLTNDEAHELLA QLLDGATMQIGDDKKAYFLRKIDHRLPYYIQLMVEKCDEILNKAGRDVLTNHDIDAAFEMIIKEGRNFDDWESRLKRYVQ REDAKYCIGILTRCAHSEPYSIQEAYNYSKKDVPAAPYKQLLDNVLIKDGYLVEENRSYRFLSPFLKEWWKHRHPKFEIE DL >Mature_401_residues AWIRPKTITGPPAEGERYLRREYINSGFWHHIKSGAHIVFSAPRRVGKTSIMKDLAKNPPEGILAFYDIIESDKTQKDLF KRLFNLLLERTKTHERLFERIRQYLKEIKIGGASVTGEADSITGGINFDKVELDYKNELLRLIEHLGKEKVRIVFLLDEF PEVIRSIELSEGQQTAIDTLHTLREIRQHEKFKNFTFVFAGSIGIHHVVASLERPALINDLHPIHVEQLTNDEAHELLAQ LLDGATMQIGDDKKAYFLRKIDHRLPYYIQLMVEKCDEILNKAGRDVLTNHDIDAAFEMIIKEGRNFDDWESRLKRYVQR EDAKYCIGILTRCAHSEPYSIQEAYNYSKKDVPAAPYKQLLDNVLIKDGYLVEENRSYRFLSPFLKEWWKHRHPKFEIED L
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47003; Mature: 46872
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWIRPKTITGPPAEGERYLRREYINSGFWHHIKSGAHIVFSAPRRVGKTSIMKDLAKNP CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC PEGILAFYDIIESDKTQKDLFKRLFNLLLERTKTHERLFERIRQYLKEIKIGGASVTGEA CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DSITGGINFDKVELDYKNELLRLIEHLGKEKVRIVFLLDEFPEVIRSIELSEGQQTAIDT CCCCCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHH LHTLREIRQHEKFKNFTFVFAGSIGIHHVVASLERPALINDLHPIHVEQLTNDEAHELLA HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCHHHHCCCCHHHHHHCCHHHHHHHH QLLDGATMQIGDDKKAYFLRKIDHRLPYYIQLMVEKCDEILNKAGRDVLTNHDIDAAFEM HHHCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH IIKEGRNFDDWESRLKRYVQREDAKYCIGILTRCAHSEPYSIQEAYNYSKKDVPAAPYKQ HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHH LLDNVLIKDGYLVEENRSYRFLSPFLKEWWKHRHPKFEIEDL HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AWIRPKTITGPPAEGERYLRREYINSGFWHHIKSGAHIVFSAPRRVGKTSIMKDLAKNP CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC PEGILAFYDIIESDKTQKDLFKRLFNLLLERTKTHERLFERIRQYLKEIKIGGASVTGEA CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DSITGGINFDKVELDYKNELLRLIEHLGKEKVRIVFLLDEFPEVIRSIELSEGQQTAIDT CCCCCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHH LHTLREIRQHEKFKNFTFVFAGSIGIHHVVASLERPALINDLHPIHVEQLTNDEAHELLA HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCHHHHCCCCHHHHHHCCHHHHHHHH QLLDGATMQIGDDKKAYFLRKIDHRLPYYIQLMVEKCDEILNKAGRDVLTNHDIDAAFEM HHHCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH IIKEGRNFDDWESRLKRYVQREDAKYCIGILTRCAHSEPYSIQEAYNYSKKDVPAAPYKQ HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHH LLDNVLIKDGYLVEENRSYRFLSPFLKEWWKHRHPKFEIEDL HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA