| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214097
Identifier: 193214097
GI number: 193214097
Start: 438466
End: 438909
Strand: Direct
Name: 193214097
Synonym: Ctha_0378
Alternate gene names: NA
Gene position: 438466-438909 (Clockwise)
Preceding gene: 193214089
Following gene: 193214098
Centisome position: 13.31
GC content: 45.95
Gene sequence:
>444_bases ATGAACGAACCCTTGCGAACCCGACTGCCAAATAATGTTGAACTGAAGTTAAAAGAAAAATATGCCGAAAGCTTTGCCGG CCAAAGCGATTTGATGGACAAGTTGGCGCAACAGTTGCTTACGCTTGAACTGGCTATTCCCGGCTTATATGCAACCGTAT TGAAACTCGTTGCCGGCGACAAGGCCACCGTGCCGGTAAACCGGATGTTTTACCTGATATTTTCTTTGTGGCTTTTGGCT CTGCTTTTGACACTATGGGCGCTATTGCCCCGTGCATGGAAGGTAAATACCGAGATAATGCAAAAGGATCCCCGTTCCAA ATCCGATGAATTAGGCATTAAAGATTTCTTTGTAAAATCCGCCGAATTTAAACGCAATTGCTTGGTTGCCGCGGCGATCC TGTTTTTCCTCGGAATCGCTTTGGCCGCATTAACCGTAACATAA
Upstream 100 bases:
>100_bases GTCTCTGCCGGAGACCGGCACGGGTTTATGCTTCTATTGCCTTTCTATTGTTTTATTTTAGTCCTTGTACTTATTATAAA TAATTCTGAATTTAGCAGCC
Downstream 100 bases:
>100_bases ACACTTTAGGAGAAGACCCGTGCAAAAACGACTGGAATTTCGTTGCTGGAATTGTGATAAACCCTATTCACTCTTCCGGA AGATTGATGAAGATAATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNEPLRTRLPNNVELKLKEKYAESFAGQSDLMDKLAQQLLTLELAIPGLYATVLKLVAGDKATVPVNRMFYLIFSLWLLA LLLTLWALLPRAWKVNTEIMQKDPRSKSDELGIKDFFVKSAEFKRNCLVAAAILFFLGIALAALTVT
Sequences:
>Translated_147_residues MNEPLRTRLPNNVELKLKEKYAESFAGQSDLMDKLAQQLLTLELAIPGLYATVLKLVAGDKATVPVNRMFYLIFSLWLLA LLLTLWALLPRAWKVNTEIMQKDPRSKSDELGIKDFFVKSAEFKRNCLVAAAILFFLGIALAALTVT >Mature_147_residues MNEPLRTRLPNNVELKLKEKYAESFAGQSDLMDKLAQQLLTLELAIPGLYATVLKLVAGDKATVPVNRMFYLIFSLWLLA LLLTLWALLPRAWKVNTEIMQKDPRSKSDELGIKDFFVKSAEFKRNCLVAAAILFFLGIALAALTVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16528; Mature: 16528
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPLRTRLPNNVELKLKEKYAESFAGQSDLMDKLAQQLLTLELAIPGLYATVLKLVAGD CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC KATVPVNRMFYLIFSLWLLALLLTLWALLPRAWKVNTEIMQKDPRSKSDELGIKDFFVKS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCCCCHHHHHHHH AEFKRNCLVAAAILFFLGIALAALTVT HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNEPLRTRLPNNVELKLKEKYAESFAGQSDLMDKLAQQLLTLELAIPGLYATVLKLVAGD CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC KATVPVNRMFYLIFSLWLLALLLTLWALLPRAWKVNTEIMQKDPRSKSDELGIKDFFVKS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCCCCHHHHHHHH AEFKRNCLVAAAILFFLGIALAALTVT HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA