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The map label for this gene is ydgJ [C]

Identifier: 193214084

GI number: 193214084

Start: 421688

End: 422692

Strand: Direct

Name: ydgJ [C]

Synonym: Ctha_0365

Alternate gene names: 193214084

Gene position: 421688-422692 (Clockwise)

Preceding gene: 193214083

Following gene: 193214085

Centisome position: 12.8

GC content: 45.47

Gene sequence:

>1005_bases
ATGAAAATTGCAGTCATTGGTCTTGGATATTGGGGACCCAACTTGGTACGGAATTTTTTAGCCGTTGAACAGGTAGACGG
CGTCATCGGATGCGACAAAGACGAAAGTCGTTTGCACAAATTAAAAAAGCGATTTCCTGAAGTAGAGCTGTGCAGTTCAC
TCGATGAAGTGCTCACGCGAGACGATGTTGCCGCTGTGGCAATTGCAACGCCAGTTTCAACACATTATCCATTAGCCAAA
AAGGCTCTTGAGGCTGGCAAACATTGTTTTGTTGAAAAACCTTTTACCACAACGGTTGCAGAGGCCGAAGACCTGATTAA
CACGGCTGAGAAAAAAGGCCTAAAAATTATGGTTGACCACACGTTTATCTACACCGGAGCGGTTCGCAAAATCAAAGAGG
TCGTTGATAAACAAATGCTTGGCGATCTTTATTACTTCGATTCAGTTCGCGTGAATTTAGGCTTGTTTCAACATGATGTG
AATGTGGTTTGGGACTTAGCCCCGCACGATCTTTCTATCATGGACTATGTGCTTGGCAAAAAGCCCACATCCGTTTCCGC
CATTGGCAGCGATCACACTGGCAGCGGCTTGGAAAATATGGCCTATCTGACGGTCGGCTTTAATAATGGATTGATGGCAC
ATTTCCATGTCAATTGGCTGGCGCCAGTGAAGATCCGCAAAACGCTCATTGGTGGGTCAAAATCCATGATTGTTTATGAT
GATATGGAAGCCAGCGAGAAGATTAAAATTTACGATAAAGGCATCGAAGTAAAAACGCGCGAAGGCGTTTACGAAACGCT
CGTGCAGTATCGCACCGGCGACATGTTAGCGCCGAAGCTCGACCAAACCGAAGCCCTCGCCATCGAGACAAACCATTTTG
TCGATTGCATGTTAAATAATAAAACCCCGCTCACAGACGGCATCTCCGGCCTCAATGTGGTGCGGATTTTGGAAGCATCG
GAAAAGTCTATTAAAAATTCCGGGAGTATCGTTAAATTAAGCTAA

Upstream 100 bases:

>100_bases
CTCGATGTGAAATTGATTTTGAAGACAATCCCGGTCATGTTTTTTTCAAAAGGTGGCTATTAATGCTGCATTAAATGATA
ACCGTTCTAAATTTAACATT

Downstream 100 bases:

>100_bases
ATTGAGTCCTTTTTTATGAGCATATCCAAAAAAGCCACAATCGGCAAAAATGTGCAAATCGGGTATAATTCCATTATTCA
TGATAATGTGATTATCGAAG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKIAVIGLGYWGPNLVRNFLAVEQVDGVIGCDKDESRLHKLKKRFPEVELCSSLDEVLTRDDVAAVAIATPVSTHYPLAK
KALEAGKHCFVEKPFTTTVAEAEDLINTAEKKGLKIMVDHTFIYTGAVRKIKEVVDKQMLGDLYYFDSVRVNLGLFQHDV
NVVWDLAPHDLSIMDYVLGKKPTSVSAIGSDHTGSGLENMAYLTVGFNNGLMAHFHVNWLAPVKIRKTLIGGSKSMIVYD
DMEASEKIKIYDKGIEVKTREGVYETLVQYRTGDMLAPKLDQTEALAIETNHFVDCMLNNKTPLTDGISGLNVVRILEAS
EKSIKNSGSIVKLS

Sequences:

>Translated_334_residues
MKIAVIGLGYWGPNLVRNFLAVEQVDGVIGCDKDESRLHKLKKRFPEVELCSSLDEVLTRDDVAAVAIATPVSTHYPLAK
KALEAGKHCFVEKPFTTTVAEAEDLINTAEKKGLKIMVDHTFIYTGAVRKIKEVVDKQMLGDLYYFDSVRVNLGLFQHDV
NVVWDLAPHDLSIMDYVLGKKPTSVSAIGSDHTGSGLENMAYLTVGFNNGLMAHFHVNWLAPVKIRKTLIGGSKSMIVYD
DMEASEKIKIYDKGIEVKTREGVYETLVQYRTGDMLAPKLDQTEALAIETNHFVDCMLNNKTPLTDGISGLNVVRILEAS
EKSIKNSGSIVKLS
>Mature_334_residues
MKIAVIGLGYWGPNLVRNFLAVEQVDGVIGCDKDESRLHKLKKRFPEVELCSSLDEVLTRDDVAAVAIATPVSTHYPLAK
KALEAGKHCFVEKPFTTTVAEAEDLINTAEKKGLKIMVDHTFIYTGAVRKIKEVVDKQMLGDLYYFDSVRVNLGLFQHDV
NVVWDLAPHDLSIMDYVLGKKPTSVSAIGSDHTGSGLENMAYLTVGFNNGLMAHFHVNWLAPVKIRKTLIGGSKSMIVYD
DMEASEKIKIYDKGIEVKTREGVYETLVQYRTGDMLAPKLDQTEALAIETNHFVDCMLNNKTPLTDGISGLNVVRILEAS
EKSIKNSGSIVKLS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=184, Percent_Identity=29.8913043478261, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI87082405, Length=267, Percent_Identity=23.9700374531835, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789848, Length=110, Percent_Identity=35.4545454545455, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36948; Mature: 36948

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVIGLGYWGPNLVRNFLAVEQVDGVIGCDKDESRLHKLKKRFPEVELCSSLDEVLTR
CEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC
DDVAAVAIATPVSTHYPLAKKALEAGKHCFVEKPFTTTVAEAEDLINTAEKKGLKIMVDH
CCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEE
TFIYTGAVRKIKEVVDKQMLGDLYYFDSVRVNLGLFQHDVNVVWDLAPHDLSIMDYVLGK
EEEEHHHHHHHHHHHHHHHHHHHEEECEEEEEEEEEEECCEEEEEECCCCHHHHHHHHCC
KPTSVSAIGSDHTGSGLENMAYLTVGFNNGLMAHFHVNWLAPVKIRKTLIGGSKSMIVYD
CCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCHHHHHHHCCCCCCEEEEE
DMEASEKIKIYDKGIEVKTREGVYETLVQYRTGDMLAPKLDQTEALAIETNHFVDCMLNN
CCCCCCEEEEEECCCEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECC
KTPLTDGISGLNVVRILEASEKSIKNSGSIVKLS
CCCCCCCCCCCEEEEEEHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MKIAVIGLGYWGPNLVRNFLAVEQVDGVIGCDKDESRLHKLKKRFPEVELCSSLDEVLTR
CEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC
DDVAAVAIATPVSTHYPLAKKALEAGKHCFVEKPFTTTVAEAEDLINTAEKKGLKIMVDH
CCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEE
TFIYTGAVRKIKEVVDKQMLGDLYYFDSVRVNLGLFQHDVNVVWDLAPHDLSIMDYVLGK
EEEEHHHHHHHHHHHHHHHHHHHEEECEEEEEEEEEEECCEEEEEECCCCHHHHHHHHCC
KPTSVSAIGSDHTGSGLENMAYLTVGFNNGLMAHFHVNWLAPVKIRKTLIGGSKSMIVYD
CCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCHHHHHHHCCCCCCEEEEE
DMEASEKIKIYDKGIEVKTREGVYETLVQYRTGDMLAPKLDQTEALAIETNHFVDCMLNN
CCCCCCEEEEEECCCEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECC
KTPLTDGISGLNVVRILEASEKSIKNSGSIVKLS
CCCCCCCCCCCEEEEEEHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916; 8759848 [H]