| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214026
Identifier: 193214026
GI number: 193214026
Start: 351118
End: 351354
Strand: Direct
Name: 193214026
Synonym: Ctha_0307
Alternate gene names: NA
Gene position: 351118-351354 (Clockwise)
Preceding gene: 193214024
Following gene: 193214029
Centisome position: 10.66
GC content: 47.68
Gene sequence:
>237_bases ATGCCAGCCGTATTTGAAAACAGAAATAGCGACAATGCGCCAGGACGGTACTATATCGATTCTCAATGTTACGACTGTGG ACTTTGCGTCGACATTTGCCCAACCATTTTTAAGCGAAACGGAAAAAAACGCTACTCCTTTGTAGGGGCACAGCCCGAAC AGGCAACCCATGAAAAGCTTTGCAAAGAAGCGTTGGAAACATGCCCATGTGGCGCAATTGGCGACGACGGCAAGTAA
Upstream 100 bases:
>100_bases AAGAGGATTTGCTTGCAATTCTATCTGGCTATGATATATTGCAGACGCATTGCATTAACTGACAATTCTCATTTCTTTTC ACATTTATTTTAATTTGATT
Downstream 100 bases:
>100_bases ACCTCGATTTTTCCCTTACTGATTTTTTTTGAAAAAATAGCCCTGAAGTCTTCATGCAAGCCTGCGCTGCACGGATGACT TTCAGGGCTGTTTTGTTTTT
Product: putative ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPAVFENRNSDNAPGRYYIDSQCYDCGLCVDICPTIFKRNGKKRYSFVGAQPEQATHEKLCKEALETCPCGAIGDDGK
Sequences:
>Translated_78_residues MPAVFENRNSDNAPGRYYIDSQCYDCGLCVDICPTIFKRNGKKRYSFVGAQPEQATHEKLCKEALETCPCGAIGDDGK >Mature_77_residues PAVFENRNSDNAPGRYYIDSQCYDCGLCVDICPTIFKRNGKKRYSFVGAQPEQATHEKLCKEALETCPCGAIGDDGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8639; Mature: 8508
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 9.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVFENRNSDNAPGRYYIDSQCYDCGLCVDICPTIFKRNGKKRYSFVGAQPEQATHEKL CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHH CKEALETCPCGAIGDDGK HHHHHHHCCCCCCCCCCC >Mature Secondary Structure PAVFENRNSDNAPGRYYIDSQCYDCGLCVDICPTIFKRNGKKRYSFVGAQPEQATHEKL CCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHH CKEALETCPCGAIGDDGK HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA