| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
Click here to switch to the map view.
The map label for this gene is 193213967
Identifier: 193213967
GI number: 193213967
Start: 294951
End: 295439
Strand: Direct
Name: 193213967
Synonym: Ctha_0248
Alternate gene names: NA
Gene position: 294951-295439 (Clockwise)
Preceding gene: 193213966
Following gene: 193213968
Centisome position: 8.96
GC content: 47.65
Gene sequence:
>489_bases ATGCACTCTGACGAACTAAATGGCCGAACGCCTTCATCAGCCAATAAACCACAAGAACCGCAACCGCAGGATCCTGCGCT CCGCAGTCCCAAACGAGCCGCCATTTTCTTTGCCTCACTTTTAATCATGACCATTGGCGTTTCGGGCATTATTGAAGGGG CTTATCTTTTCTTCAAAAGCGCGATTCTTGTTCGCGCCAAAGGCCTCGACTCCGGCTTATTGCGGATAAATTCCATTTTC TCTTTCCTTGCTGGCCTGTTGATGGTCTTAACCGCAGCCGGAACAATTCGAATTTCCTACATGGCTTGGCGAGCCGCCTT TTTTACAACCACCATTTTCGTGCTCAATAGCGCATGGGGAAGCTACATTTTCTATGGAAATCCACTGAGCTTTGGCTCAT TCATACACCTAACGGCTTCCCTTGCCATTTTTCTCCTTCTTTGGAAGGCGAGCGGCGTTTGGAACGATACTCTACTTTAT GAAGAATAA
Upstream 100 bases:
>100_bases GCGGTTTCATTTTACATGAAGCGCCGGTTTTTTTGTATATTTTTCGGCTGTTTGCTTTTCCATTTCTAATTTTTGCACAA TCTGTTGAGCTTACGCCAAT
Downstream 100 bases:
>100_bases ATTCGCACGATATGGAAACGAAAATCAAGCTGTTCATTACTGGCGGAACTATCGATAAAAAATACAACGAGTTAGATGGT TCGCTCGGATTTCACCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MHSDELNGRTPSSANKPQEPQPQDPALRSPKRAAIFFASLLIMTIGVSGIIEGAYLFFKSAILVRAKGLDSGLLRINSIF SFLAGLLMVLTAAGTIRISYMAWRAAFFTTTIFVLNSAWGSYIFYGNPLSFGSFIHLTASLAIFLLLWKASGVWNDTLLY EE
Sequences:
>Translated_162_residues MHSDELNGRTPSSANKPQEPQPQDPALRSPKRAAIFFASLLIMTIGVSGIIEGAYLFFKSAILVRAKGLDSGLLRINSIF SFLAGLLMVLTAAGTIRISYMAWRAAFFTTTIFVLNSAWGSYIFYGNPLSFGSFIHLTASLAIFLLLWKASGVWNDTLLY EE >Mature_162_residues MHSDELNGRTPSSANKPQEPQPQDPALRSPKRAAIFFASLLIMTIGVSGIIEGAYLFFKSAILVRAKGLDSGLLRINSIF SFLAGLLMVLTAAGTIRISYMAWRAAFFTTTIFVLNSAWGSYIFYGNPLSFGSFIHLTASLAIFLLLWKASGVWNDTLLY EE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17804; Mature: 17804
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSDELNGRTPSSANKPQEPQPQDPALRSPKRAAIFFASLLIMTIGVSGIIEGAYLFFKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AILVRAKGLDSGLLRINSIFSFLAGLLMVLTAAGTIRISYMAWRAAFFTTTIFVLNSAWG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCC SYIFYGNPLSFGSFIHLTASLAIFLLLWKASGVWNDTLLYEE CEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECC >Mature Secondary Structure MHSDELNGRTPSSANKPQEPQPQDPALRSPKRAAIFFASLLIMTIGVSGIIEGAYLFFKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AILVRAKGLDSGLLRINSIFSFLAGLLMVLTAAGTIRISYMAWRAAFFTTTIFVLNSAWG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCC SYIFYGNPLSFGSFIHLTASLAIFLLLWKASGVWNDTLLYEE CEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA