| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is pssA [H]
Identifier: 193213927
GI number: 193213927
Start: 243677
End: 244534
Strand: Direct
Name: pssA [H]
Synonym: Ctha_0208
Alternate gene names: 193213927
Gene position: 243677-244534 (Clockwise)
Preceding gene: 193213926
Following gene: 193213928
Centisome position: 7.4
GC content: 47.55
Gene sequence:
>858_bases ATGACCGAAAAAAATAGACCGGCTGAACAGCCTCATCAACCGAAATACGCGCCGCACGACGCACCCCGAACGACCAAGCG AAAGTTTAAAATGCGCAAAGTACAAATTCCGCGAGTGCCTCCTTCGGCTGTTCCATCTGCCTTTACGGTCATGAACATGG CTTGCGGCTATGTGGCCATTGTTATGGCCAGCCAAGACAGTTTTACCGCGGCTGGCTGGTTTATTATTTTTGCTGCCATT TTTGATACGCTTGACGGCTTTGTTGCTCGCCTCACCAATGCCTCATCTGAATTTGGTGTTGAATTGGATTCGCTCTCCGA CCTGGTTTCTTTTGGCGCTGCGCCCTCTTTTCTTGCTTACAAATTCGGCCTGAACGAATACGGCGTTGGCGTTGGGCTGG GGCTAAGCTCGCTCTTGATGATCGGCAGCGGCCTACGATTAGCACGATTTAATGTCCAATTGGTTGGTTTTTCAAAGGAT TACTTTTCGGGCTTGCCTACGCCTTCGCAGGCCATGACGCTTGCCACGTTTGTCATGTGGGCGCATAACGAACAGGTGTT TTTTGCGCCGCATCTTCATGTGGTTTTGGCTGTTCTCACGGTGCTCTTGGCAGGTTTGATGGTTAGCAAAGTGCGCTACG ATACGCTGCCCAAATTTAGGCCCGACGATTTTCGCTCGTCGCCGGTTAAAATGTCATTATACATCATCTCGTTTATTTGC ATTCTGATCTTTCAAGCCAAGGCATTTTTCATTGCCATGATGATGTACATACTTTTCGGATTAATTCGCTCGATTTATCA TTTTTTCAGTGAAGAAACAGATATCGCTTCCGAAAATGCAACAACCCATAACATGTAA
Upstream 100 bases:
>100_bases TAGCAGACTTGCTATATGTAGTTATGTTGCTAGAAAAAATTGACGAACCGCACTTTTAGCTCAAGATTTTTTCGGGGGAC AAGATTTTAAACTAATAAGT
Downstream 100 bases:
>100_bases ATGATTTTTTTTAAACTCGCAAAAATCAAGCAGAGCTTGCCGGTTTTTTGCATAGAAATCATTTTGAGCTCATCTCGTTT CTAATAAAAAAATAACTTTT
Product: CDP-diacylglycerol/serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTEKNRPAEQPHQPKYAPHDAPRTTKRKFKMRKVQIPRVPPSAVPSAFTVMNMACGYVAIVMASQDSFTAAGWFIIFAAI FDTLDGFVARLTNASSEFGVELDSLSDLVSFGAAPSFLAYKFGLNEYGVGVGLGLSSLLMIGSGLRLARFNVQLVGFSKD YFSGLPTPSQAMTLATFVMWAHNEQVFFAPHLHVVLAVLTVLLAGLMVSKVRYDTLPKFRPDDFRSSPVKMSLYIISFIC ILIFQAKAFFIAMMMYILFGLIRSIYHFFSEETDIASENATTHNM
Sequences:
>Translated_285_residues MTEKNRPAEQPHQPKYAPHDAPRTTKRKFKMRKVQIPRVPPSAVPSAFTVMNMACGYVAIVMASQDSFTAAGWFIIFAAI FDTLDGFVARLTNASSEFGVELDSLSDLVSFGAAPSFLAYKFGLNEYGVGVGLGLSSLLMIGSGLRLARFNVQLVGFSKD YFSGLPTPSQAMTLATFVMWAHNEQVFFAPHLHVVLAVLTVLLAGLMVSKVRYDTLPKFRPDDFRSSPVKMSLYIISFIC ILIFQAKAFFIAMMMYILFGLIRSIYHFFSEETDIASENATTHNM >Mature_284_residues TEKNRPAEQPHQPKYAPHDAPRTTKRKFKMRKVQIPRVPPSAVPSAFTVMNMACGYVAIVMASQDSFTAAGWFIIFAAIF DTLDGFVARLTNASSEFGVELDSLSDLVSFGAAPSFLAYKFGLNEYGVGVGLGLSSLLMIGSGLRLARFNVQLVGFSKDY FSGLPTPSQAMTLATFVMWAHNEQVFFAPHLHVVLAVLTVLLAGLMVSKVRYDTLPKFRPDDFRSSPVKMSLYIISFICI LIFQAKAFFIAMMMYILFGLIRSIYHFFSEETDIASENATTHNM
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=135, Percent_Identity=39.2592592592593, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 31648; Mature: 31517
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKNRPAEQPHQPKYAPHDAPRTTKRKFKMRKVQIPRVPPSAVPSAFTVMNMACGYVAI CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHEE VMASQDSFTAAGWFIIFAAIFDTLDGFVARLTNASSEFGVELDSLSDLVSFGAAPSFLAY EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCHHHHH KFGLNEYGVGVGLGLSSLLMIGSGLRLARFNVQLVGFSKDYFSGLPTPSQAMTLATFVMW HHCCCHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECHHHHCCCCCCHHHHHHHHHHHH AHNEQVFFAPHLHVVLAVLTVLLAGLMVSKVRYDTLPKFRPDDFRSSPVKMSLYIISFIC CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH ILIFQAKAFFIAMMMYILFGLIRSIYHFFSEETDIASENATTHNM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TEKNRPAEQPHQPKYAPHDAPRTTKRKFKMRKVQIPRVPPSAVPSAFTVMNMACGYVAI CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHEE VMASQDSFTAAGWFIIFAAIFDTLDGFVARLTNASSEFGVELDSLSDLVSFGAAPSFLAY EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCHHHHH KFGLNEYGVGVGLGLSSLLMIGSGLRLARFNVQLVGFSKDYFSGLPTPSQAMTLATFVMW HHCCCHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECHHHHCCCCCCHHHHHHHHHHHH AHNEQVFFAPHLHVVLAVLTVLLAGLMVSKVRYDTLPKFRPDDFRSSPVKMSLYIISFIC CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH ILIFQAKAFFIAMMMYILFGLIRSIYHFFSEETDIASENATTHNM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]