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The map label for this gene is 193213921

Identifier: 193213921

GI number: 193213921

Start: 236474

End: 237262

Strand: Direct

Name: 193213921

Synonym: Ctha_0202

Alternate gene names: NA

Gene position: 236474-237262 (Clockwise)

Preceding gene: 193213913

Following gene: 193213922

Centisome position: 7.18

GC content: 38.78

Gene sequence:

>789_bases
ATGGGAAAACGGCTCACCTTCGTACTGACATTCGCTATTCTTATTTTCCCAAATGTGAGACATTCACAAGCTCAGCAAAT
TTCTGACCTGACAAAATCGAAAATAGACTCCCTAACTACACTGCTGGATACTTGCGAAAATTTACCTGCTTATGAAACAC
TTGCCACCTATTATTACCAAAAACGTGAATTTATCGAAGCAGCCAAGCTTTTTAAACATGCCGTTCGCTTAAGCGACTCC
ATCGCTGCCAATCATTTCGGACTTGCCCAATCCTATTTTGCACTCCATCAATATCGATATGCTGCCGCCTCTTATCAAAA
AGTCACGAAACTAACGCCGTTCTTTTTCACTGCTTTTTATAATTTAGGGATTACTTATTTACACCTGGGGCAATATCAGG
AAGCAAAAAAAACATTTATCCATGCCCTTTCACTTGAACCGGAAAATTCCTATTGCTTTTTTCATATCGCAAAAGCCTAT
CGTGGTTTGAGGCTTTTTGAACAAGCGCTTGCCGCACTTCACTACGCTGCTGAACTTTCACCTGGATTTTCTGAAGCCCA
TTTTCTACTTGGAGATATTTATTTTGAATTGGAACAATATCAAAACGCGGCTGTGAACTATCAGCAAATGCTGATTCTTT
CACCAAATGCTACTTTAGCACTTTATCGACTTGGCCTTACATTTATTCGCTTAAAAGAGAAAACCAAAGCGCAACAAGCT
TATAATCTTTTAGAAAAAATCAACCCATATTTAGCTCAAAAGCTGCTCAATCAAATCGAGATTATGTGA

Upstream 100 bases:

>100_bases
CGCAAATTACAGCCCCCCTCTATTGCTGTAGTTTATTCTCAAGTTTTTCTTTCTATACAATTCTTTCATTTTAGCAGTCA
ATTTATTTCCCTTTTAACCC

Downstream 100 bases:

>100_bases
TCAAAATCCGCAAAGCTTTTAGCGTTGTTTTTTCTATCCGACATCCATGAAAATCCATTACGAGTTGTTAACTTCCCCTG
AATTTGAAACCACATATTGA

Product: tetratricopeptide domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; Peptidase; TPR Domain Containing Protein; Serine/Threonine Protein Kinase With TPR Repeats; Methyltransferase Type; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; Glycosyl Transferase Family Protein; TPR Repeat Protein; Sel1 Repeat Family; Sulfotransferase; Tetratricopeptide Repeat Domain-Containing Protein; TPR Repeats Containing Protein; Serine/Threonine Protein Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MGKRLTFVLTFAILIFPNVRHSQAQQISDLTKSKIDSLTTLLDTCENLPAYETLATYYYQKREFIEAAKLFKHAVRLSDS
IAANHFGLAQSYFALHQYRYAAASYQKVTKLTPFFFTAFYNLGITYLHLGQYQEAKKTFIHALSLEPENSYCFFHIAKAY
RGLRLFEQALAALHYAAELSPGFSEAHFLLGDIYFELEQYQNAAVNYQQMLILSPNATLALYRLGLTFIRLKEKTKAQQA
YNLLEKINPYLAQKLLNQIEIM

Sequences:

>Translated_262_residues
MGKRLTFVLTFAILIFPNVRHSQAQQISDLTKSKIDSLTTLLDTCENLPAYETLATYYYQKREFIEAAKLFKHAVRLSDS
IAANHFGLAQSYFALHQYRYAAASYQKVTKLTPFFFTAFYNLGITYLHLGQYQEAKKTFIHALSLEPENSYCFFHIAKAY
RGLRLFEQALAALHYAAELSPGFSEAHFLLGDIYFELEQYQNAAVNYQQMLILSPNATLALYRLGLTFIRLKEKTKAQQA
YNLLEKINPYLAQKLLNQIEIM
>Mature_261_residues
GKRLTFVLTFAILIFPNVRHSQAQQISDLTKSKIDSLTTLLDTCENLPAYETLATYYYQKREFIEAAKLFKHAVRLSDSI
AANHFGLAQSYFALHQYRYAAASYQKVTKLTPFFFTAFYNLGITYLHLGQYQEAKKTFIHALSLEPENSYCFFHIAKAYR
GLRLFEQALAALHYAAELSPGFSEAHFLLGDIYFELEQYQNAAVNYQQMLILSPNATLALYRLGLTFIRLKEKTKAQQAY
NLLEKINPYLAQKLLNQIEIM

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=206, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI32307148, Length=206, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=206, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=206, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6319387, Length=221, Percent_Identity=23.5294117647059, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17647755, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24585827, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24585829, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30209; Mature: 30078

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRLTFVLTFAILIFPNVRHSQAQQISDLTKSKIDSLTTLLDTCENLPAYETLATYYYQ
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KREFIEAAKLFKHAVRLSDSIAANHFGLAQSYFALHQYRYAAASYQKVTKLTPFFFTAFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLGITYLHLGQYQEAKKTFIHALSLEPENSYCFFHIAKAYRGLRLFEQALAALHYAAELS
HCCHHEEECCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
PGFSEAHFLLGDIYFELEQYQNAAVNYQQMLILSPNATLALYRLGLTFIRLKEKTKAQQA
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
YNLLEKINPYLAQKLLNQIEIM
HHHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKRLTFVLTFAILIFPNVRHSQAQQISDLTKSKIDSLTTLLDTCENLPAYETLATYYYQ
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KREFIEAAKLFKHAVRLSDSIAANHFGLAQSYFALHQYRYAAASYQKVTKLTPFFFTAFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLGITYLHLGQYQEAKKTFIHALSLEPENSYCFFHIAKAYRGLRLFEQALAALHYAAELS
HCCHHEEECCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
PGFSEAHFLLGDIYFELEQYQNAAVNYQQMLILSPNATLALYRLGLTFIRLKEKTKAQQA
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
YNLLEKINPYLAQKLLNQIEIM
HHHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA