| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213912
Identifier: 193213912
GI number: 193213912
Start: 226869
End: 227657
Strand: Direct
Name: 193213912
Synonym: Ctha_0193
Alternate gene names: NA
Gene position: 226869-227657 (Clockwise)
Preceding gene: 193213911
Following gene: 193213913
Centisome position: 6.89
GC content: 47.66
Gene sequence:
>789_bases ATGATTCAAGCCAAGCCTATTCTTAATATTTTTTGTTTGATTGCCGTATTTCTCTCCTTTGGATCTTCAAAAGCCAACGC CCAAAGCACCGCTGGCAGCAGCGCAAGCGAAGAACCGCGCTACTTATTCAATATGCCCACCGCAGGTGTTTTGCAGCGAG GCGTTTATGCAATTGAAGGCTGGGCTTATGGTGGCGGCGGCTCATTTGTCTCGCTCAGTGTTGGCCTTTCAGAACAGCTA ACGTTTGGGATTGCTTATGGCGCTGGAAATTTAATTGGCAGCGGCTCGCCGGATTGGAATGAGTTGCCTGGCGTTATGGT TCGCTACCGGATTTTTGAGGAAGAACTCAATTTTCCAGCTATCACGATTGGGTTTGAATCTCAAGGGCGCGAAAACTACC TCGACGGCGCCAATCGTTTTGAAAGAAAATCACCGGGATTTTTCGCCGCAGCCACCAAAAATTATGCGCTGCTCGGCTTT ATTGCCCTTCATGGCGGAATCAATTACAGCCTTGAAAATGACGACGATAAAGATTTGAACTTTTATTTTGGGGTAGAAAA AACCATCGGCAAAGAACTTTCAGCCTATGCGCAATACGATGCGGCCATTAATGACAACAACAAAACAGCGCTTGGCGATG GACGTGGCTACCTCGATATGGGCTTGCGATGGTCTCTTGGAAAAGGCATGACGATTGAACTCAACCTCGCCAACATTTCT GATAATTTCAAGCATCTCGACGCAGCCAGCCGCAGCGTCAGACTTGAATACGTCCACCGATTCGACTAA
Upstream 100 bases:
>100_bases TTCACTCAAAATTCATGAGGACGGCGGGTTTAGCCAAAAATTTTTAAAATTTTATAGTACCGTTGCTGTTTAATCCAACA ATTAAAAACGACCGCGATAT
Downstream 100 bases:
>100_bases CCATTTCTCTTCCTTTGGCAATATTGGGGGCAAGCAACCTCTCGCCCCCAATTTATTTATCCTTCCTTTTATTATTTATT TCGGCCAAATTATTTGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MIQAKPILNIFCLIAVFLSFGSSKANAQSTAGSSASEEPRYLFNMPTAGVLQRGVYAIEGWAYGGGGSFVSLSVGLSEQL TFGIAYGAGNLIGSGSPDWNELPGVMVRYRIFEEELNFPAITIGFESQGRENYLDGANRFERKSPGFFAAATKNYALLGF IALHGGINYSLENDDDKDLNFYFGVEKTIGKELSAYAQYDAAINDNNKTALGDGRGYLDMGLRWSLGKGMTIELNLANIS DNFKHLDAASRSVRLEYVHRFD
Sequences:
>Translated_262_residues MIQAKPILNIFCLIAVFLSFGSSKANAQSTAGSSASEEPRYLFNMPTAGVLQRGVYAIEGWAYGGGGSFVSLSVGLSEQL TFGIAYGAGNLIGSGSPDWNELPGVMVRYRIFEEELNFPAITIGFESQGRENYLDGANRFERKSPGFFAAATKNYALLGF IALHGGINYSLENDDDKDLNFYFGVEKTIGKELSAYAQYDAAINDNNKTALGDGRGYLDMGLRWSLGKGMTIELNLANIS DNFKHLDAASRSVRLEYVHRFD >Mature_262_residues MIQAKPILNIFCLIAVFLSFGSSKANAQSTAGSSASEEPRYLFNMPTAGVLQRGVYAIEGWAYGGGGSFVSLSVGLSEQL TFGIAYGAGNLIGSGSPDWNELPGVMVRYRIFEEELNFPAITIGFESQGRENYLDGANRFERKSPGFFAAATKNYALLGF IALHGGINYSLENDDDKDLNFYFGVEKTIGKELSAYAQYDAAINDNNKTALGDGRGYLDMGLRWSLGKGMTIELNLANIS DNFKHLDAASRSVRLEYVHRFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28589; Mature: 28589
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQAKPILNIFCLIAVFLSFGSSKANAQSTAGSSASEEPRYLFNMPTAGVLQRGVYAIEG CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCEEEEE WAYGGGGSFVSLSVGLSEQLTFGIAYGAGNLIGSGSPDWNELPGVMVRYRIFEEELNFPA EEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHCCCHHHHEEEHHHHCCCCE ITIGFESQGRENYLDGANRFERKSPGFFAAATKNYALLGFIALHGGINYSLENDDDKDLN EEEEECCCCCHHHHCCHHHHHCCCCCEEEEECCCEEEEEEEEECCCEEEEECCCCCCCEE FYFGVEKTIGKELSAYAQYDAAINDNNKTALGDGRGYLDMGLRWSLGKGMTIELNLANIS EEECCHHHHHHHHHHHHHHCCEECCCCCEEECCCCCEEEECEEEECCCCCEEEEEEECCC DNFKHLDAASRSVRLEYVHRFD CCHHHHHHHCCEEEEEEEEECC >Mature Secondary Structure MIQAKPILNIFCLIAVFLSFGSSKANAQSTAGSSASEEPRYLFNMPTAGVLQRGVYAIEG CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCEEEEE WAYGGGGSFVSLSVGLSEQLTFGIAYGAGNLIGSGSPDWNELPGVMVRYRIFEEELNFPA EEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHCCCHHHHEEEHHHHCCCCE ITIGFESQGRENYLDGANRFERKSPGFFAAATKNYALLGFIALHGGINYSLENDDDKDLN EEEEECCCCCHHHHCCHHHHHCCCCCEEEEECCCEEEEEEEEECCCEEEEECCCCCCCEE FYFGVEKTIGKELSAYAQYDAAINDNNKTALGDGRGYLDMGLRWSLGKGMTIELNLANIS EEECCHHHHHHHHHHHHHHCCEECCCCCEEECCCCCEEEECEEEECCCCCEEEEEEECCC DNFKHLDAASRSVRLEYVHRFD CCHHHHHHHCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA