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The map label for this gene is hslV [H]

Identifier: 193213900

GI number: 193213900

Start: 212559

End: 213086

Strand: Direct

Name: hslV [H]

Synonym: Ctha_0181

Alternate gene names: 193213900

Gene position: 212559-213086 (Clockwise)

Preceding gene: 193213899

Following gene: 193213901

Centisome position: 6.45

GC content: 46.97

Gene sequence:

>528_bases
ATGCGCGCGACAACCGTCATTGGTGTTTTGCGAAATGGAAAAGCGGCGCTTGGCAGCGACGGACAAATGACTTATGGCAA
TACGATCTTAAAACATTCGACGACAAAAATCAGAAAAATGCACGATGGCAAAATCATTGTGGGTTTTGCGGGCGCAACTG
CCGACGCATTAACTTTGTTGGAGCGATTTGAAGAAAAACTTCAAGCGTACGGCGGTCGTTTAGATCGTTCCGCTGTTGAG
CTGGCCAAAGAATGGCGCATGGATAAATATTTGCGCCGCCTGGAAGCCATGCTGGCTGTGGTTTCGCGCGAAAAAGCGTT
GATTATTTCTGGAACGGGCGATGTGATTGAACCGGAAGATGGCATTGTGGCCATCGGAAGTGGCAGCATGTACGCGCTTT
CTGCTGCACGCGCGCTCTTGAAACACACCAACTGCGATGCAAAAACCATTGTGGAAGAATCGTTGAACATTGCCGGTGAA
ATCTGCATTTACACCAATACTAATATTCAAATTCAAGAAATTGTTTAA

Upstream 100 bases:

>100_bases
TCGCGAGCAAATGAATATTCCAGTAGCTCGCCTTCGAAAACAAATACAGTCTCTTAAATAATTCAAACCAGTTTGTGTAG
TGAGTAACGAGAAACCAATT

Downstream 100 bases:

>100_bases
GCCCTCTTTTTTTAAAGAGATACACGCTTTCAAATTTTATTCTGGGTTATTTGGGAAGGTATTTCCATTGTTTGACGAAT
ACGATACATTCTGAATTTGA

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRATTVIGVLRNGKAALGSDGQMTYGNTILKHSTTKIRKMHDGKIIVGFAGATADALTLLERFEEKLQAYGGRLDRSAVE
LAKEWRMDKYLRRLEAMLAVVSREKALIISGTGDVIEPEDGIVAIGSGSMYALSAARALLKHTNCDAKTIVEESLNIAGE
ICIYTNTNIQIQEIV

Sequences:

>Translated_175_residues
MRATTVIGVLRNGKAALGSDGQMTYGNTILKHSTTKIRKMHDGKIIVGFAGATADALTLLERFEEKLQAYGGRLDRSAVE
LAKEWRMDKYLRRLEAMLAVVSREKALIISGTGDVIEPEDGIVAIGSGSMYALSAARALLKHTNCDAKTIVEESLNIAGE
ICIYTNTNIQIQEIV
>Mature_175_residues
MRATTVIGVLRNGKAALGSDGQMTYGNTILKHSTTKIRKMHDGKIIVGFAGATADALTLLERFEEKLQAYGGRLDRSAVE
LAKEWRMDKYLRRLEAMLAVVSREKALIISGTGDVIEPEDGIVAIGSGSMYALSAARALLKHTNCDAKTIVEESLNIAGE
ICIYTNTNIQIQEIV

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=171, Percent_Identity=52.6315789473684, Blast_Score=192, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 19012; Mature: 19012

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATTVIGVLRNGKAALGSDGQMTYGNTILKHSTTKIRKMHDGKIIVGFAGATADALTLL
CCCCEEEEEEECCCCCCCCCCCEECCCEEECCCHHHHHEECCCEEEEEECCCHHHHHHHH
ERFEEKLQAYGGRLDRSAVELAKEWRMDKYLRRLEAMLAVVSREKALIISGTGDVIEPED
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCC
GIVAIGSGSMYALSAARALLKHTNCDAKTIVEESLNIAGEICIYTNTNIQIQEIV
CEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEEC
>Mature Secondary Structure
MRATTVIGVLRNGKAALGSDGQMTYGNTILKHSTTKIRKMHDGKIIVGFAGATADALTLL
CCCCEEEEEEECCCCCCCCCCCEECCCEEECCCHHHHHEECCCEEEEEECCCHHHHHHHH
ERFEEKLQAYGGRLDRSAVELAKEWRMDKYLRRLEAMLAVVSREKALIISGTGDVIEPED
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCC
GIVAIGSGSMYALSAARALLKHTNCDAKTIVEESLNIAGEICIYTNTNIQIQEIV
CEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA