| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213825
Identifier: 193213825
GI number: 193213825
Start: 123200
End: 125125
Strand: Direct
Name: 193213825
Synonym: Ctha_0106
Alternate gene names: NA
Gene position: 123200-125125 (Clockwise)
Preceding gene: 193213824
Following gene: 193213826
Centisome position: 3.74
GC content: 48.55
Gene sequence:
>1926_bases ATGCGGCTGATTCTTTGGACTTTTTCCTTGCTATTTTTTCTTTTCAACGCGCGGGTTTCCTATTCCCAAACGGATGCTGC GCGACGCCCGATTCCTTATCCCGTGCGTTATTCAAATGCGTTCAAAGAAGCTGTGCATCATCAAACGCGAACGCTGAACG GCGCGCCGGGCAAGGCTTATTGGTCAAATCCGACTCGCTACACACTCCATGCGCTGCTTTCCCCTGAAACCAAAATGCTA CAAGGCCAAGCCACCATTTCTTACACCAATCAATCGCCTGATACGCTTAGCCAATTGGTGGTGCAGCTTCGGCAAAACCT TCACAAAGAAGGCGCTATTCGCAATCGTGAAGTGGAAACTACGGACGGAATGCAGCTTTCGAAAGTTATGGTCAATGGGC AGCATTACATGGAACGACGCCTTCGCTCGCGAACTGGCTATAAAGTTCAAGGCACGCTGATGTATATCAGCCTCTATCAG GATTTATATCCTGGCGAAACGGCAGAGCTTGCGTTCAGCTGGAATTTTCAAATTCCTGATGGTGACTCGCCGCGTATGGG GCAAGATGGCGAAGTTTTTTTTCTGGGTTATTGGTATCCGCAAATGGCCGTTTATGATGACATTCAAGGCTGGAACGACG ATCTCTACATGGGCAATGCAGAATTTTACATGGACTACGCCGACTACGATGTAAACATCACAGTTCCTGAAGGCTGGCTC ATTGCCGCCACTGGCGAGTTGCAAAATCCCGAGGAAGTGCTTTCCACCGAAACGCTCACAAAACTTGAGCAGGCTCGCGA AAGCGATGAAGTAACCACAATTGTGGATAAAACCGAGCAATTTCCTGGCGTTTCAACGCGCACCAGCGAAAGCGGCTTGC TCACCTGGCACTTTACCGCCGAAAATGTCCGCGACTTTGCATTTGGCACTTCCGACCGCTACGTGTGGGACGCGATTCCT ACAAACATTTCGGGCAAAAAAATCATGGTGCACTCGTTCTATCGTTGGGGGACTTCCGCATGGAAACGCGCGGCGGAATT TGCTCGCTATTCGGTGGAGTATCTTTCCAGCCGACTTGTGCCGTATCCCTATCCAAATCTATCGGTGGTGGAAGGCATTA TCGGCGGCGGCATGGAATACCCAATGATTACGCTGATTGGCGGACGGCGAACCGATTTCACGCTTTTTAGCGTCGTTTTT CATGAAATCGCGCACAACTGGTTTCCCATGCTGGTTGGCAGCAACGAAACACAATTTGCTTGGATGGACGAAGGCCTGGT AACTTACTACACCAACGAAGGCAAAGAGACTTTTTTTACCAACGACATGGTTTGGGAATTCGAAGCGGATCAATACGAAA TTTTTTCCGAAACGGATACCGAAATTGAGCCGATGCGCCACGCCGACTTGTTTCCAATTTCAGGCATTGCGCGCCGCGTT GGTTGCTACAATAAACCCGCACTGGCACTTCGCGCCCTTCAAGGCGTGTTTGGATATCAATTGTTTAACAACGCCATGCG ATTATATATCGATCGTTGGACAAACAAGCACCCGCAGCCATTTGATTTTTTCAATACGTTTGAGCAAGTAACGGGAAAAA ATCTCGATTGGTTTTGGACCAGCTTTTTCTACGAGACTTGGCCGCTCGATCAAGCCATTTCAGAAGTGAAAATCGAAAAC GGCCAAACCACCGTTTTCATTGAGGATTTGGGACTGTTACCGATGCCCGTGCTTGTTTGCGCCACGCTTCAGGATAGCTC CCTGCTTGAAAAAGAAATTCCCGTTGAACACTGGCTACAAGGCAACCGCACAGCCGAAATTACATTTGAGAGCAACAAAG TGAAAAAAGTAGACCTTGACCCACAGCATTTTTTCCCCGACATTAATAGGAAAAATAATTCATGGTCGTTGGAAAGCGCG CCTTAA
Upstream 100 bases:
>100_bases TCTCGAAGCGCTGCTTAGCCAAAAACTTGGAAAGCCCATTCGGTTAAAATAAGCTTCTTGTCAATTTCTGCCTGCCCGGC GACTTAAGAACGTAAATTTT
Downstream 100 bases:
>100_bases CCAAAAGGCGATTCAATTACCAGGAAAAAATTCAAGAAACGCGATCAAATAAAATTCATTGCAAAAAATGAGATAACAGC CTTTTCTACAATCCAATTAA
Product: peptidase
Products: NA
Alternate protein names: Aminopeptidase; Peptidase M1 Membrane Alanine Aminopeptidase; Peptidase; Aminopeptidase N-Like Protein; Aminopeptidase N; M1 Family Aminopeptidase; Membrane Alanine Aminopeptidase; Secreted Aminopeptidase; Metallopeptidase; Peptidase M1 Membrane Alanine Aminopeptidase-Like Protein; Aminopeptidase M1 Family; Aminopeptidase Protein
Number of amino acids: Translated: 641; Mature: 641
Protein sequence:
>641_residues MRLILWTFSLLFFLFNARVSYSQTDAARRPIPYPVRYSNAFKEAVHHQTRTLNGAPGKAYWSNPTRYTLHALLSPETKML QGQATISYTNQSPDTLSQLVVQLRQNLHKEGAIRNREVETTDGMQLSKVMVNGQHYMERRLRSRTGYKVQGTLMYISLYQ DLYPGETAELAFSWNFQIPDGDSPRMGQDGEVFFLGYWYPQMAVYDDIQGWNDDLYMGNAEFYMDYADYDVNITVPEGWL IAATGELQNPEEVLSTETLTKLEQARESDEVTTIVDKTEQFPGVSTRTSESGLLTWHFTAENVRDFAFGTSDRYVWDAIP TNISGKKIMVHSFYRWGTSAWKRAAEFARYSVEYLSSRLVPYPYPNLSVVEGIIGGGMEYPMITLIGGRRTDFTLFSVVF HEIAHNWFPMLVGSNETQFAWMDEGLVTYYTNEGKETFFTNDMVWEFEADQYEIFSETDTEIEPMRHADLFPISGIARRV GCYNKPALALRALQGVFGYQLFNNAMRLYIDRWTNKHPQPFDFFNTFEQVTGKNLDWFWTSFFYETWPLDQAISEVKIEN GQTTVFIEDLGLLPMPVLVCATLQDSSLLEKEIPVEHWLQGNRTAEITFESNKVKKVDLDPQHFFPDINRKNNSWSLESA P
Sequences:
>Translated_641_residues MRLILWTFSLLFFLFNARVSYSQTDAARRPIPYPVRYSNAFKEAVHHQTRTLNGAPGKAYWSNPTRYTLHALLSPETKML QGQATISYTNQSPDTLSQLVVQLRQNLHKEGAIRNREVETTDGMQLSKVMVNGQHYMERRLRSRTGYKVQGTLMYISLYQ DLYPGETAELAFSWNFQIPDGDSPRMGQDGEVFFLGYWYPQMAVYDDIQGWNDDLYMGNAEFYMDYADYDVNITVPEGWL IAATGELQNPEEVLSTETLTKLEQARESDEVTTIVDKTEQFPGVSTRTSESGLLTWHFTAENVRDFAFGTSDRYVWDAIP TNISGKKIMVHSFYRWGTSAWKRAAEFARYSVEYLSSRLVPYPYPNLSVVEGIIGGGMEYPMITLIGGRRTDFTLFSVVF HEIAHNWFPMLVGSNETQFAWMDEGLVTYYTNEGKETFFTNDMVWEFEADQYEIFSETDTEIEPMRHADLFPISGIARRV GCYNKPALALRALQGVFGYQLFNNAMRLYIDRWTNKHPQPFDFFNTFEQVTGKNLDWFWTSFFYETWPLDQAISEVKIEN GQTTVFIEDLGLLPMPVLVCATLQDSSLLEKEIPVEHWLQGNRTAEITFESNKVKKVDLDPQHFFPDINRKNNSWSLESA P >Mature_641_residues MRLILWTFSLLFFLFNARVSYSQTDAARRPIPYPVRYSNAFKEAVHHQTRTLNGAPGKAYWSNPTRYTLHALLSPETKML QGQATISYTNQSPDTLSQLVVQLRQNLHKEGAIRNREVETTDGMQLSKVMVNGQHYMERRLRSRTGYKVQGTLMYISLYQ DLYPGETAELAFSWNFQIPDGDSPRMGQDGEVFFLGYWYPQMAVYDDIQGWNDDLYMGNAEFYMDYADYDVNITVPEGWL IAATGELQNPEEVLSTETLTKLEQARESDEVTTIVDKTEQFPGVSTRTSESGLLTWHFTAENVRDFAFGTSDRYVWDAIP TNISGKKIMVHSFYRWGTSAWKRAAEFARYSVEYLSSRLVPYPYPNLSVVEGIIGGGMEYPMITLIGGRRTDFTLFSVVF HEIAHNWFPMLVGSNETQFAWMDEGLVTYYTNEGKETFFTNDMVWEFEADQYEIFSETDTEIEPMRHADLFPISGIARRV GCYNKPALALRALQGVFGYQLFNNAMRLYIDRWTNKHPQPFDFFNTFEQVTGKNLDWFWTSFFYETWPLDQAISEVKIEN GQTTVFIEDLGLLPMPVLVCATLQDSSLLEKEIPVEHWLQGNRTAEITFESNKVKKVDLDPQHFFPDINRKNNSWSLESA P
Specific function: Unknown
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74066; Mature: 74066
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILWTFSLLFFLFNARVSYSQTDAARRPIPYPVRYSNAFKEAVHHQTRTLNGAPGKAY CEEEHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC WSNPTRYTLHALLSPETKMLQGQATISYTNQSPDTLSQLVVQLRQNLHKEGAIRNREVET CCCCCCEEEEEEECCCHHHEECCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC TDGMQLSKVMVNGQHYMERRLRSRTGYKVQGTLMYISLYQDLYPGETAELAFSWNFQIPD CCCCEEEHEEECCHHHHHHHHHHCCCCEEEEEEEEEEEHHHHCCCCCEEEEEEEEEECCC GDSPRMGQDGEVFFLGYWYPQMAVYDDIQGWNDDLYMGNAEFYMDYADYDVNITVPEGWL CCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCEEECCCEEEEEEECCEEEEECCCCEE IAATGELQNPEEVLSTETLTKLEQARESDEVTTIVDKTEQFPGVSTRTSESGLLTWHFTA EEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCEEEEEEEC ENVRDFAFGTSDRYVWDAIPTNISGKKIMVHSFYRWGTSAWKRAAEFARYSVEYLSSRLV CCHHHHHCCCCCCEEEECCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHCCCC PYPYPNLSVVEGIIGGGMEYPMITLIGGRRTDFTLFSVVFHEIAHNWFPMLVGSNETQFA CCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEE WMDEGLVTYYTNEGKETFFTNDMVWEFEADQYEIFSETDTEIEPMRHADLFPISGIARRV EECCCEEEEEECCCCEEEEECCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH GCYNKPALALRALQGVFGYQLFNNAMRLYIDRWTNKHPQPFDFFNTFEQVTGKNLDWFWT CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCCCHHHHHHHHHHCCCCCEEEH SFFYETWPLDQAISEVKIENGQTTVFIEDLGLLPMPVLVCATLQDSSLLEKEIPVEHWLQ HHHHHHCCHHHHHHHEEECCCCEEEEEECCCCCCCCHHHEEECCCCHHHHHCCCHHHHHC GNRTAEITFESNKVKKVDLDPQHFFPDINRKNNSWSLESAP CCCEEEEEEECCCEEEECCCHHHHCCCCCCCCCCEECCCCC >Mature Secondary Structure MRLILWTFSLLFFLFNARVSYSQTDAARRPIPYPVRYSNAFKEAVHHQTRTLNGAPGKAY CEEEHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC WSNPTRYTLHALLSPETKMLQGQATISYTNQSPDTLSQLVVQLRQNLHKEGAIRNREVET CCCCCCEEEEEEECCCHHHEECCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC TDGMQLSKVMVNGQHYMERRLRSRTGYKVQGTLMYISLYQDLYPGETAELAFSWNFQIPD CCCCEEEHEEECCHHHHHHHHHHCCCCEEEEEEEEEEEHHHHCCCCCEEEEEEEEEECCC GDSPRMGQDGEVFFLGYWYPQMAVYDDIQGWNDDLYMGNAEFYMDYADYDVNITVPEGWL CCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCEEECCCEEEEEEECCEEEEECCCCEE IAATGELQNPEEVLSTETLTKLEQARESDEVTTIVDKTEQFPGVSTRTSESGLLTWHFTA EEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCEEEEEEEC ENVRDFAFGTSDRYVWDAIPTNISGKKIMVHSFYRWGTSAWKRAAEFARYSVEYLSSRLV CCHHHHHCCCCCCEEEECCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHCCCC PYPYPNLSVVEGIIGGGMEYPMITLIGGRRTDFTLFSVVFHEIAHNWFPMLVGSNETQFA CCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEE WMDEGLVTYYTNEGKETFFTNDMVWEFEADQYEIFSETDTEIEPMRHADLFPISGIARRV EECCCEEEEEECCCCEEEEECCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH GCYNKPALALRALQGVFGYQLFNNAMRLYIDRWTNKHPQPFDFFNTFEQVTGKNLDWFWT CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCCCHHHHHHHHHHCCCCCEEEH SFFYETWPLDQAISEVKIENGQTTVFIEDLGLLPMPVLVCATLQDSSLLEKEIPVEHWLQ HHHHHHCCHHHHHHHEEECCCCEEEEEECCCCCCCCHHHEEECCCCHHHHHCCCHHHHHC GNRTAEITFESNKVKKVDLDPQHFFPDINRKNNSWSLESAP CCCEEEEEEECCCEEEECCCHHHHCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA