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The map label for this gene is cirA [C]

Identifier: 193213767

GI number: 193213767

Start: 59645

End: 61552

Strand: Direct

Name: cirA [C]

Synonym: Ctha_0048

Alternate gene names: 193213767

Gene position: 59645-61552 (Clockwise)

Preceding gene: 193213766

Following gene: 193213768

Centisome position: 1.81

GC content: 49.06

Gene sequence:

>1908_bases
TTGTTAGAACCGAAGGTTTTCACAAGCGACCCGATTATTGTGACCTCCAAGCACACACACAACAAATTCGAGGAAATCAC
GGAAAAATCGAGCGTTTTGGAGGGGCAGGCGCTGCAAAAGGAACTGAGCCAATCGCTGGCGGCAACGCTGAAAAATGAGA
CCGGTCTTGCGATGCGTTCAATGGGCCCCGCACCGTCGCGCCCCGTCATTCGTGGCCTTGGCTCTGACCGCGTGCTCATT
AGCGAGGACGGCAACCGCACAACTGACCTTTCCAGCACCTCGCCCGACCATGCGGTGACCGTTGACCCGTTCACGATCGA
GCGCCTGGAAGTGATTCGCGGTCCAAAAGTACTATTGCAAAGTCCCACGACCATTGGCGGCGTCATCAATGCGGTGCGCC
ATGAAATTCCGCAAGAACTTCGCGAAACGGTTTCCGGCACGCTCGGCGCGTATGGCGAAACGGCCAATAGCGGCTACCTA
ACGGCTGCGACCCTTGAAGTTCCGCTCAACCCGTTTATGATTCGCGGAGAAATTAGCCGTCGCAAAACCGGCGACATTTC
CACACCGATAGGCACGCTCGGAAATTCGGAATCGGAAAATCTTAATTACAGCGTTGGCGGAAGCTACATTTGGGACTACG
GCTTTGTAGGTGCATCCATGCGCGACTTCAATCTTGATTATGGCATTCCCGGCGGATTTGTCGGCGCACATCCTAACGGC
GTCAGTATTGAGATGCAAAAGCAAGTCCGAAATGTCAAGTCGCGCATTAATCTGAATATGGAACGACTTGAAAATATTGA
AATTCACCTCACAAATTCATATTACCGCCACAAAGAATTGGAGTCGAATAATTCGGTTGGCGCAGATTTTCGCATTCGCA
ATAATTATGGGTTTGTGAATCTGAACCATTTGGCACTTGGCTTTTTGGAAAAAGGAACGGTTGGGTTTTGGATGGACAGC
CGCGATTTTGACATTGGCGGAAATGTATTTACGCCGTCGTCTAAGTCGCTGCATTTGGCGGGTTATGTCTATGAATCGTT
TACCTTGAATCGAGTCAATCTTGAATTTGCCGCGCGCTACAATTTTGATAACATCCGCCCCGATGCGGAAGACCCGGATT
CGCGCATCGGCAATATTCGCGAGCGAACTTTTCACACCTACTCGCTTTCGTTTTCGGCGCTCTATCAACTTACCGAAACG
TTTTCTTTTGGCGGAAATCTGAGCAAATCCTCCCGCGTGCCGACCATCGAGGAGCTTTATTCGGAAGGACCGCACCTTGC
CGCTTATTCCTACGAAGTCGGCAATCCAGATTTGGATGCTGAAAGTGGCGTTGGCTCGGAGCTTTTCATGTACTACAAAT
CCGCTTCGGTTTATGTTTTGGGAACGGCATTCCTGAATTACCTTTCCAGCTACATTATTCCGAGAAATACGGGAGAAACA
AATTGGCGACTGATTTTACCCGTGTATCAAACCTACGGCGTAGATGCGCTCTTTTTTGGCAGTGAGTTCGATTTGGAATG
GTATTTAAGTCCAAAATGGACTTTCCAAACGTCCGCAAGCTATACGAATGGCTCGTTCGCTTCTTCCGGCAAACCGTTGC
CATGGATTCCGCCGCTAAAGGGAAAAGTTGGAATAAGCTATTCGAACGCCCCAATCACGTTGAATTTGAATACCGAATGG
GCGGCAAATCAATATCGCGTGGATGAATTTGAAGATCCGACGGACGGCTATGCGATTCTTAACGCTTCGGCGCTTTACGC
CTTAACGCTCGGCAAGCAAGTGCATCATTTTTCACTCTCGGCAGATAATATTTTCGATACCGAATATCGCAATCATCTCT
CGCGCGTGAAAAGCATCATGCCGGAAGCTGGACGCAATTTTCGATTTACTTATAAGATGTTTTTTTAA

Upstream 100 bases:

>100_bases
ACGGAAGGCACGCTGGTGATTTTGGTTACGCATCCGGCTTATCAATCGAGTCGGGAACGAATCGCCATACAAAAAAAACG
AGTCCAAGACATTTTATATT

Downstream 100 bases:

>100_bases
ACTTCAGGGATTTTTCTCCAAAATCATTGCACATGGCACTTTCATTAGTTAAGTGTTAAGTGTCATGTGTCATATGATTC
ATTACGCTTTTTCTGTTCCT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MLEPKVFTSDPIIVTSKHTHNKFEEITEKSSVLEGQALQKELSQSLAATLKNETGLAMRSMGPAPSRPVIRGLGSDRVLI
SEDGNRTTDLSSTSPDHAVTVDPFTIERLEVIRGPKVLLQSPTTIGGVINAVRHEIPQELRETVSGTLGAYGETANSGYL
TAATLEVPLNPFMIRGEISRRKTGDISTPIGTLGNSESENLNYSVGGSYIWDYGFVGASMRDFNLDYGIPGGFVGAHPNG
VSIEMQKQVRNVKSRINLNMERLENIEIHLTNSYYRHKELESNNSVGADFRIRNNYGFVNLNHLALGFLEKGTVGFWMDS
RDFDIGGNVFTPSSKSLHLAGYVYESFTLNRVNLEFAARYNFDNIRPDAEDPDSRIGNIRERTFHTYSLSFSALYQLTET
FSFGGNLSKSSRVPTIEELYSEGPHLAAYSYEVGNPDLDAESGVGSELFMYYKSASVYVLGTAFLNYLSSYIIPRNTGET
NWRLILPVYQTYGVDALFFGSEFDLEWYLSPKWTFQTSASYTNGSFASSGKPLPWIPPLKGKVGISYSNAPITLNLNTEW
AANQYRVDEFEDPTDGYAILNASALYALTLGKQVHHFSLSADNIFDTEYRNHLSRVKSIMPEAGRNFRFTYKMFF

Sequences:

>Translated_635_residues
MLEPKVFTSDPIIVTSKHTHNKFEEITEKSSVLEGQALQKELSQSLAATLKNETGLAMRSMGPAPSRPVIRGLGSDRVLI
SEDGNRTTDLSSTSPDHAVTVDPFTIERLEVIRGPKVLLQSPTTIGGVINAVRHEIPQELRETVSGTLGAYGETANSGYL
TAATLEVPLNPFMIRGEISRRKTGDISTPIGTLGNSESENLNYSVGGSYIWDYGFVGASMRDFNLDYGIPGGFVGAHPNG
VSIEMQKQVRNVKSRINLNMERLENIEIHLTNSYYRHKELESNNSVGADFRIRNNYGFVNLNHLALGFLEKGTVGFWMDS
RDFDIGGNVFTPSSKSLHLAGYVYESFTLNRVNLEFAARYNFDNIRPDAEDPDSRIGNIRERTFHTYSLSFSALYQLTET
FSFGGNLSKSSRVPTIEELYSEGPHLAAYSYEVGNPDLDAESGVGSELFMYYKSASVYVLGTAFLNYLSSYIIPRNTGET
NWRLILPVYQTYGVDALFFGSEFDLEWYLSPKWTFQTSASYTNGSFASSGKPLPWIPPLKGKVGISYSNAPITLNLNTEW
AANQYRVDEFEDPTDGYAILNASALYALTLGKQVHHFSLSADNIFDTEYRNHLSRVKSIMPEAGRNFRFTYKMFF
>Mature_635_residues
MLEPKVFTSDPIIVTSKHTHNKFEEITEKSSVLEGQALQKELSQSLAATLKNETGLAMRSMGPAPSRPVIRGLGSDRVLI
SEDGNRTTDLSSTSPDHAVTVDPFTIERLEVIRGPKVLLQSPTTIGGVINAVRHEIPQELRETVSGTLGAYGETANSGYL
TAATLEVPLNPFMIRGEISRRKTGDISTPIGTLGNSESENLNYSVGGSYIWDYGFVGASMRDFNLDYGIPGGFVGAHPNG
VSIEMQKQVRNVKSRINLNMERLENIEIHLTNSYYRHKELESNNSVGADFRIRNNYGFVNLNHLALGFLEKGTVGFWMDS
RDFDIGGNVFTPSSKSLHLAGYVYESFTLNRVNLEFAARYNFDNIRPDAEDPDSRIGNIRERTFHTYSLSFSALYQLTET
FSFGGNLSKSSRVPTIEELYSEGPHLAAYSYEVGNPDLDAESGVGSELFMYYKSASVYVLGTAFLNYLSSYIIPRNTGET
NWRLILPVYQTYGVDALFFGSEFDLEWYLSPKWTFQTSASYTNGSFASSGKPLPWIPPLKGKVGISYSNAPITLNLNTEW
AANQYRVDEFEDPTDGYAILNASALYALTLGKQVHHFSLSADNIFDTEYRNHLSRVKSIMPEAGRNFRFTYKMFF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 70806; Mature: 70806

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPKVFTSDPIIVTSKHTHNKFEEITEKSSVLEGQALQKELSQSLAATLKNETGLAMRS
CCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECC
MGPAPSRPVIRGLGSDRVLISEDGNRTTDLSSTSPDHAVTVDPFTIERLEVIRGPKVLLQ
CCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEE
SPTTIGGVINAVRHEIPQELRETVSGTLGAYGETANSGYLTAATLEVPLNPFMIRGEISR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCC
RKTGDISTPIGTLGNSESENLNYSVGGSYIWDYGFVGASMRDFNLDYGIPGGFVGAHPNG
CCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCC
VSIEMQKQVRNVKSRINLNMERLENIEIHLTNSYYRHKELESNNSVGADFRIRNNYGFVN
CEEEHHHHHHHHHHHHCCCHHHCCCEEEEEECCHHHHHHCCCCCCCCCEEEEECCCCEEE
LNHLALGFLEKGTVGFWMDSRDFDIGGNVFTPSSKSLHLAGYVYESFTLNRVNLEFAARY
EHHHEEEEECCCCEEEEECCCCCCCCCCEECCCCCCEEEEEEEEEEEEEEEEEEEEEEEE
NFDNIRPDAEDPDSRIGNIRERTFHTYSLSFSALYQLTETFSFGGNLSKSSRVPTIEELY
CCCCCCCCCCCCHHHHCCHHHHEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
SEGPHLAAYSYEVGNPDLDAESGVGSELFMYYKSASVYVLGTAFLNYLSSYIIPRNTGET
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHCEECCCCCC
NWRLILPVYQTYGVDALFFGSEFDLEWYLSPKWTFQTSASYTNGSFASSGKPLPWIPPLK
CCEEEEEEHHHCCCEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
GKVGISYSNAPITLNLNTEWAANQYRVDEFEDPTDGYAILNASALYALTLGKQVHHFSLS
CCEEEEECCCCEEEEECCCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCEEEEEECC
ADNIFDTEYRNHLSRVKSIMPEAGRNFRFTYKMFF
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
>Mature Secondary Structure
MLEPKVFTSDPIIVTSKHTHNKFEEITEKSSVLEGQALQKELSQSLAATLKNETGLAMRS
CCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECC
MGPAPSRPVIRGLGSDRVLISEDGNRTTDLSSTSPDHAVTVDPFTIERLEVIRGPKVLLQ
CCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEE
SPTTIGGVINAVRHEIPQELRETVSGTLGAYGETANSGYLTAATLEVPLNPFMIRGEISR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCC
RKTGDISTPIGTLGNSESENLNYSVGGSYIWDYGFVGASMRDFNLDYGIPGGFVGAHPNG
CCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCC
VSIEMQKQVRNVKSRINLNMERLENIEIHLTNSYYRHKELESNNSVGADFRIRNNYGFVN
CEEEHHHHHHHHHHHHCCCHHHCCCEEEEEECCHHHHHHCCCCCCCCCEEEEECCCCEEE
LNHLALGFLEKGTVGFWMDSRDFDIGGNVFTPSSKSLHLAGYVYESFTLNRVNLEFAARY
EHHHEEEEECCCCEEEEECCCCCCCCCCEECCCCCCEEEEEEEEEEEEEEEEEEEEEEEE
NFDNIRPDAEDPDSRIGNIRERTFHTYSLSFSALYQLTETFSFGGNLSKSSRVPTIEELY
CCCCCCCCCCCCHHHHCCHHHHEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
SEGPHLAAYSYEVGNPDLDAESGVGSELFMYYKSASVYVLGTAFLNYLSSYIIPRNTGET
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHCEECCCCCC
NWRLILPVYQTYGVDALFFGSEFDLEWYLSPKWTFQTSASYTNGSFASSGKPLPWIPPLK
CCEEEEEEHHHCCCEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
GKVGISYSNAPITLNLNTEWAANQYRVDEFEDPTDGYAILNASALYALTLGKQVHHFSLS
CCEEEEECCCCEEEEECCCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCEEEEEECC
ADNIFDTEYRNHLSRVKSIMPEAGRNFRFTYKMFF
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]