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The map label for this gene is scpB [H]

Identifier: 192291563

GI number: 192291563

Start: 3436101

End: 3437399

Strand: Reverse

Name: scpB [H]

Synonym: Rpal_3190

Alternate gene names: 192291563

Gene position: 3437399-3436101 (Counterclockwise)

Preceding gene: 192291564

Following gene: 192291562

Centisome position: 59.84

GC content: 67.28

Gene sequence:

>1299_bases
ATGGCAAGTCTGGCGGAGAAGCGCATCGTGGAGTTCGAACAGCCGGTCGAACATCTCGCTGATGACAGCGCCGAACAGCA
GCCGCAGTCCCGGCCCGAGGAGCTGCGCCTGCTCGAAGCCCTGCTGTTCGCGTCCCCCGAGCCGCTCGATCAGGCTGCGC
TCGCCAAGCGCATGCCGGAAGGCGTGGACGTCAAGGTCGCGCTGAAGCAATTGCAAGAGGACTACGCCAGCCGTGGCGTG
AATCTCGTCCGCATTGCCAACAAGTGGACGTTTCGCACCGCCGGCGATCTCGCCTGGCTGATGACGCGCGAGTCCACCGA
GACTCGCAAGCTGTCGCGTGCCGCGATCGAGATGCTGGCGATCATCGCCTATCACCAGCCGATCACCCGTGTTGAGATCG
AAGAGATCCGCGGCGTGGCGACCTCGAAGGGTACGCTCGACGTGCTGCTGGAGACCGGCTGGATCAAGCCGCGTGGACGT
CGCAAGACGCCGGGCCGGCCGCTGACCTTCGGCACCACCGAAGCGTTCCTGTCGCAGTTCAGCCTGGAGTCGCTCACCGA
CCTGCCGGGCCTCGAAGAACTCAAGGGCACCGGCCTGCTCGACACCCGCCTGCCGACCGGCTTCAGCGTGCCGACGCCGT
CGGACGATCCGGCGCTGCGCGAAGACGAGGACCCGCTCGAGCCCGGCGATCTCGACCTGTCGCTGGCGCCGCAGCCCGAG
CTGGATCTGGAGGGCGACGCCGCGGCCGCCGACGAAGCTGGCGTGTCCGAAACCGCCGAGGCCACGGGAGCCGCGGAGAC
CGGCGAGGCCGAGCTTGGCGTGGCCGAAGCCGCCGCGCACGACGGGGCCGCGCCCGAGGTTGGTTTCGCCGAGACTTCGG
AGGACGATGCGGAGGAGGCCGAGACCGGCTTTGCCGAGACGTCCGACGACGAGGCCGAGGCCGAAACCGGTTTCGCCGAG
ACCGAGGATGCCGATGAGGCTGGCGAGATCGAAGACGCTGCCGAGGTTGGTGAGGTTGGCGATCGCGAGCTGGAAGCCGA
AGAGGCTGACGACGACGATTTCGATACCGAGGACGACGTCAGGATCGAGATCGAGACCGTCGAAGTGGAACTGGTTGCGT
CGGATGATCAGGACGAGGACGTCGTCGCCGAGGCGGACGAGGTCGCGTCTGACGATGTCGAAGCCGGCGATGACGAGACC
GGCCACACCGACGCTCCGGAACTCGATACCGCTGAGCCGGAGGGCTCCGAAGAGGACGCCGAGCACGACGCCCACGGCGA
GGATGATCAGCACCAGTAA

Upstream 100 bases:

>100_bases
TGGCGCCTTTGTATTTTCGTAAGCGTCCGCCGTCTCCAGCGATGGAAGCGGCAGCCTTACCGGATACTCCGGTCGGGTAG
TGGAAGAAGGAGACCGAGCC

Downstream 100 bases:

>100_bases
GTCAGCGCGACGCTTGGCAAGGAACTGGATCGGGCGCGATCAACTCGCCGTTGCGACAGCTTAAATCCTTGTTTCGGGCC
GCTCTTTCACCTAGCTTCGC

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MASLAEKRIVEFEQPVEHLADDSAEQQPQSRPEELRLLEALLFASPEPLDQAALAKRMPEGVDVKVALKQLQEDYASRGV
NLVRIANKWTFRTAGDLAWLMTRESTETRKLSRAAIEMLAIIAYHQPITRVEIEEIRGVATSKGTLDVLLETGWIKPRGR
RKTPGRPLTFGTTEAFLSQFSLESLTDLPGLEELKGTGLLDTRLPTGFSVPTPSDDPALREDEDPLEPGDLDLSLAPQPE
LDLEGDAAAADEAGVSETAEATGAAETGEAELGVAEAAAHDGAAPEVGFAETSEDDAEEAETGFAETSDDEAEAETGFAE
TEDADEAGEIEDAAEVGEVGDRELEAEEADDDDFDTEDDVRIEIETVEVELVASDDQDEDVVAEADEVASDDVEAGDDET
GHTDAPELDTAEPEGSEEDAEHDAHGEDDQHQ

Sequences:

>Translated_432_residues
MASLAEKRIVEFEQPVEHLADDSAEQQPQSRPEELRLLEALLFASPEPLDQAALAKRMPEGVDVKVALKQLQEDYASRGV
NLVRIANKWTFRTAGDLAWLMTRESTETRKLSRAAIEMLAIIAYHQPITRVEIEEIRGVATSKGTLDVLLETGWIKPRGR
RKTPGRPLTFGTTEAFLSQFSLESLTDLPGLEELKGTGLLDTRLPTGFSVPTPSDDPALREDEDPLEPGDLDLSLAPQPE
LDLEGDAAAADEAGVSETAEATGAAETGEAELGVAEAAAHDGAAPEVGFAETSEDDAEEAETGFAETSDDEAEAETGFAE
TEDADEAGEIEDAAEVGEVGDRELEAEEADDDDFDTEDDVRIEIETVEVELVASDDQDEDVVAEADEVASDDVEAGDDET
GHTDAPELDTAEPEGSEEDAEHDAHGEDDQHQ
>Mature_431_residues
ASLAEKRIVEFEQPVEHLADDSAEQQPQSRPEELRLLEALLFASPEPLDQAALAKRMPEGVDVKVALKQLQEDYASRGVN
LVRIANKWTFRTAGDLAWLMTRESTETRKLSRAAIEMLAIIAYHQPITRVEIEEIRGVATSKGTLDVLLETGWIKPRGRR
KTPGRPLTFGTTEAFLSQFSLESLTDLPGLEELKGTGLLDTRLPTGFSVPTPSDDPALREDEDPLEPGDLDLSLAPQPEL
DLEGDAAAADEAGVSETAEATGAAETGEAELGVAEAAAHDGAAPEVGFAETSEDDAEEAETGFAETSDDEAEAETGFAET
EDADEAGEIEDAAEVGEVGDRELEAEEADDDDFDTEDDVRIEIETVEVELVASDDQDEDVVAEADEVASDDVEAGDDETG
HTDAPELDTAEPEGSEEDAEHDAHGEDDQHQ

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 46494; Mature: 46363

Theoretical pI: Translated: 3.67; Mature: 3.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLAEKRIVEFEQPVEHLADDSAEQQPQSRPEELRLLEALLFASPEPLDQAALAKRMPE
CCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
GVDVKVALKQLQEDYASRGVNLVRIANKWTFRTAGDLAWLMTRESTETRKLSRAAIEMLA
CCCHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHH
IIAYHQPITRVEIEEIRGVATSKGTLDVLLETGWIKPRGRRKTPGRPLTFGTTEAFLSQF
HHHHCCCCHHEEHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHHH
SLESLTDLPGLEELKGTGLLDTRLPTGFSVPTPSDDPALREDEDPLEPGDLDLSLAPQPE
HHHHHHCCCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
LDLEGDAAAADEAGVSETAEATGAAETGEAELGVAEAAAHDGAAPEVGFAETSEDDAEEA
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
ETGFAETSDDEAEAETGFAETEDADEAGEIEDAAEVGEVGDRELEAEEADDDDFDTEDDV
HCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
RIEIETVEVELVASDDQDEDVVAEADEVASDDVEAGDDETGHTDAPELDTAEPEGSEEDA
EEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EHDAHGEDDQHQ
CCCCCCCCCCCC
>Mature Secondary Structure 
ASLAEKRIVEFEQPVEHLADDSAEQQPQSRPEELRLLEALLFASPEPLDQAALAKRMPE
CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
GVDVKVALKQLQEDYASRGVNLVRIANKWTFRTAGDLAWLMTRESTETRKLSRAAIEMLA
CCCHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHH
IIAYHQPITRVEIEEIRGVATSKGTLDVLLETGWIKPRGRRKTPGRPLTFGTTEAFLSQF
HHHHCCCCHHEEHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHHH
SLESLTDLPGLEELKGTGLLDTRLPTGFSVPTPSDDPALREDEDPLEPGDLDLSLAPQPE
HHHHHHCCCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
LDLEGDAAAADEAGVSETAEATGAAETGEAELGVAEAAAHDGAAPEVGFAETSEDDAEEA
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
ETGFAETSDDEAEAETGFAETEDADEAGEIEDAAEVGEVGDRELEAEEADDDDFDTEDDV
HCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
RIEIETVEVELVASDDQDEDVVAEADEVASDDVEAGDDETGHTDAPELDTAEPEGSEEDA
EEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EHDAHGEDDQHQ
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]