| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is tatC [H]
Identifier: 192291560
GI number: 192291560
Start: 3434186
End: 3434995
Strand: Reverse
Name: tatC [H]
Synonym: Rpal_3187
Alternate gene names: 192291560
Gene position: 3434995-3434186 (Counterclockwise)
Preceding gene: 192291561
Following gene: 192291559
Centisome position: 59.8
GC content: 61.98
Gene sequence:
>810_bases ATGAGTGCCGAGGATATCGAGGCCTCCAAGGCGCCGCTGATGGACCACCTGATCGAGCTGCGGTCGCGGCTGATCAAGGC GCTGCTCGGCTTCGGCATCGCGTTCATCTTCTGCTTCTTCTTCGCCAAGCAGATCTACAACGTGTTGGTGTGGCCGTTCG TCTGGGTCGCGGGGCCGGAGAATTCGAAGTTCATCTACACCGCGCTGCTCGAATACTTCCTCACCCAGCTCAAGCTGGCG ATGTTCGGCGCCGGCTTCATCTCGTTCCCGATTATCGCCACCCAGATCTACAAATTCGTCGCACCGGGATTGTACAAGCA CGAGCGCAACGCCTTCGTGCCGTATCTGATCGCCACACCCGGCTTCTTTCTGCTCGGCTCGCTGGTGGTGTACTTCCTGG TGCTGCCGATGCTGGTGCGGTTCTCGCTCGGCATGCAGCAGATGGGCGGCGCCGAGACCGCGCAGATACAGCTTCTGCCC AAGGTCGGCGAATATCTGTCGCTGATGATGTCGCTGATCTTCGCGTTCGGCCTGGCATTTCAGCTGCCGGTGATCCTGAC GCTGCTCGGCCGGATCGGCGTGCTGACCGCCAAGCAGCTCAAGGAGAAGCGCCGCTACTTCATCGTCGGCGCCTTCATCA TCGCCGCGGTTCTGACCCCGCCCGACGTGATCAGCCAGGCCTCGCTCGCGATCCCGCTGCTGCTGCTGTACGAAGGCTCG ATCATCGCTGTGTCGATCGTCGAAAAGAAGCGCGCCGCGGCAGACGCTAGCGCCAACGCCAGCACCGACTCCTCGACACC GGCCGCCTAA
Upstream 100 bases:
>100_bases CGCATTTGCCGGTCGTGGCTGAAACGCACGCGCTCGCCACGCCTGATGCCGCGCCTCCGGATCTGGCGCATCCCGAACCG ACCAAGGACGCCAAAGCGTC
Downstream 100 bases:
>100_bases GCCCGGCTGTTTCCTCTCTCTGAATGGGTTTCGGCGTCCGCTATGTTGACGCCGCAAATCCGATTTGTTGGCAGGTCGGC CCCGCCGGCGCGCGCTACGA
Product: Sec-independent protein translocase subunit TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSAEDIEASKAPLMDHLIELRSRLIKALLGFGIAFIFCFFFAKQIYNVLVWPFVWVAGPENSKFIYTALLEYFLTQLKLA MFGAGFISFPIIATQIYKFVAPGLYKHERNAFVPYLIATPGFFLLGSLVVYFLVLPMLVRFSLGMQQMGGAETAQIQLLP KVGEYLSLMMSLIFAFGLAFQLPVILTLLGRIGVLTAKQLKEKRRYFIVGAFIIAAVLTPPDVISQASLAIPLLLLYEGS IIAVSIVEKKRAAADASANASTDSSTPAA
Sequences:
>Translated_269_residues MSAEDIEASKAPLMDHLIELRSRLIKALLGFGIAFIFCFFFAKQIYNVLVWPFVWVAGPENSKFIYTALLEYFLTQLKLA MFGAGFISFPIIATQIYKFVAPGLYKHERNAFVPYLIATPGFFLLGSLVVYFLVLPMLVRFSLGMQQMGGAETAQIQLLP KVGEYLSLMMSLIFAFGLAFQLPVILTLLGRIGVLTAKQLKEKRRYFIVGAFIIAAVLTPPDVISQASLAIPLLLLYEGS IIAVSIVEKKRAAADASANASTDSSTPAA >Mature_268_residues SAEDIEASKAPLMDHLIELRSRLIKALLGFGIAFIFCFFFAKQIYNVLVWPFVWVAGPENSKFIYTALLEYFLTQLKLAM FGAGFISFPIIATQIYKFVAPGLYKHERNAFVPYLIATPGFFLLGSLVVYFLVLPMLVRFSLGMQQMGGAETAQIQLLPK VGEYLSLMMSLIFAFGLAFQLPVILTLLGRIGVLTAKQLKEKRRYFIVGAFIIAAVLTPPDVISQASLAIPLLLLYEGSI IAVSIVEKKRAAADASANASTDSSTPAA
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=267, Percent_Identity=34.8314606741573, Blast_Score=159, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 29564; Mature: 29433
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEDIEASKAPLMDHLIELRSRLIKALLGFGIAFIFCFFFAKQIYNVLVWPFVWVAGPE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC NSKFIYTALLEYFLTQLKLAMFGAGFISFPIIATQIYKFVAPGLYKHERNAFVPYLIATP CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHCC GFFLLGSLVVYFLVLPMLVRFSLGMQQMGGAETAQIQLLPKVGEYLSLMMSLIFAFGLAF HHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHH QLPVILTLLGRIGVLTAKQLKEKRRYFIVGAFIIAAVLTPPDVISQASLAIPLLLLYEGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC IIAVSIVEKKRAAADASANASTDSSTPAA EEEEEHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SAEDIEASKAPLMDHLIELRSRLIKALLGFGIAFIFCFFFAKQIYNVLVWPFVWVAGPE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC NSKFIYTALLEYFLTQLKLAMFGAGFISFPIIATQIYKFVAPGLYKHERNAFVPYLIATP CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHCC GFFLLGSLVVYFLVLPMLVRFSLGMQQMGGAETAQIQLLPKVGEYLSLMMSLIFAFGLAF HHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHH QLPVILTLLGRIGVLTAKQLKEKRRYFIVGAFIIAAVLTPPDVISQASLAIPLLLLYEGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC IIAVSIVEKKRAAADASANASTDSSTPAA EEEEEHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]