Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is yghU [H]

Identifier: 192291374

GI number: 192291374

Start: 3264749

End: 3265621

Strand: Reverse

Name: yghU [H]

Synonym: Rpal_2996

Alternate gene names: 192291374

Gene position: 3265621-3264749 (Counterclockwise)

Preceding gene: 192291378

Following gene: 192291366

Centisome position: 56.85

GC content: 65.06

Gene sequence:

>873_bases
ATGACCGACGCCCCCTACACGCCGCCCAAAGTCTGGACCTGGGACAAGGAAAACGGCGGCAAATTCGCGTCGATCAACCG
CCCGATCGCCGGCCCCACCCATGACAAGGAGCTGCCGGTCGGCAAGCATCCGCTGCAGCTGTATTCGCTGGCGACGCCGA
ACGGCCAGAAGGTGACGATCCTGCTCGAAGAACTGCTGGCGCGCGGCCACACCGGCGCCGAATACGACGCCTGGCTGATC
AAGATCGGCGACGGCGACCAGTTCTCGTCGGGCTTCGTGCAGGTCAATCCGAATTCGAAGATCCCGGCCCTGCTCGATCG
CTCGGTGAATCCGCCGCAGCGCGTGTTCGAATCCGGCTCGATCCTGCTCTACCTCGCCGAGAAGTTCAGCGAATTCATCC
CGAAGGATCCGGCCGGCCGCACCGAATGCCTGAACTGGCTGTTCTGGCAGATGGGCTCGGCCCCGTATCTCGGCGGCGGC
TTCGGCCATTTCTATGCCTATGCGCCGGAGAAGTGGGAGTACCCGATCAACCGCTTCGCCATGGAGGTGAAGCGGCAGAT
GGACGTGCTCGACCGCCGGCTGGCCGAGACCGAGTATCTCGCCGGCGCCGAATACTCGATCGCCGATATCGCGGTGTGGC
CGTGGTACGGCGGGCTCGCCAACGGCGTGCTGTACGGCGACAGCGCCACCTTCCTGGATGTGGCCAGCTACAAGAACGTC
CAGCGCTGGACCAAGGCGATCGGGGCCCGTCCCGCGGTGAAGCGCGGCCGCATCGTCAACCGCATCAGCGGCGACCTCTC
CACCCAGCTCCACGAACGCCACGACGCCGGCGACTTCGAGACCAAGACGCAGGACAAGCTCGAGGCGAAGTAA

Upstream 100 bases:

>100_bases
GGCATGACCAAGCTGCCGCGATGCCCCTTGCAATGCGCGCGCGGCTCGCCAATCTCTGCTGGTCCCCAACCACAATCCGA
ACTCAATCCGGAGCCCATCG

Downstream 100 bases:

>100_bases
TCTCCCGCACCTCGTCATTCCGGGGCGCGCGCAGCGCGAACCCGGAATCCCGAGGTCATCGCGCACTGCGTTTCCACAAG
CTCCAGATTCCGGGTTCGCT

Product: glutathione S-transferase YghU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTDAPYTPPKVWTWDKENGGKFASINRPIAGPTHDKELPVGKHPLQLYSLATPNGQKVTILLEELLARGHTGAEYDAWLI
KIGDGDQFSSGFVQVNPNSKIPALLDRSVNPPQRVFESGSILLYLAEKFSEFIPKDPAGRTECLNWLFWQMGSAPYLGGG
FGHFYAYAPEKWEYPINRFAMEVKRQMDVLDRRLAETEYLAGAEYSIADIAVWPWYGGLANGVLYGDSATFLDVASYKNV
QRWTKAIGARPAVKRGRIVNRISGDLSTQLHERHDAGDFETKTQDKLEAK

Sequences:

>Translated_290_residues
MTDAPYTPPKVWTWDKENGGKFASINRPIAGPTHDKELPVGKHPLQLYSLATPNGQKVTILLEELLARGHTGAEYDAWLI
KIGDGDQFSSGFVQVNPNSKIPALLDRSVNPPQRVFESGSILLYLAEKFSEFIPKDPAGRTECLNWLFWQMGSAPYLGGG
FGHFYAYAPEKWEYPINRFAMEVKRQMDVLDRRLAETEYLAGAEYSIADIAVWPWYGGLANGVLYGDSATFLDVASYKNV
QRWTKAIGARPAVKRGRIVNRISGDLSTQLHERHDAGDFETKTQDKLEAK
>Mature_289_residues
TDAPYTPPKVWTWDKENGGKFASINRPIAGPTHDKELPVGKHPLQLYSLATPNGQKVTILLEELLARGHTGAEYDAWLIK
IGDGDQFSSGFVQVNPNSKIPALLDRSVNPPQRVFESGSILLYLAEKFSEFIPKDPAGRTECLNWLFWQMGSAPYLGGGF
GHFYAYAPEKWEYPINRFAMEVKRQMDVLDRRLAETEYLAGAEYSIADIAVWPWYGGLANGVLYGDSATFLDVASYKNVQ
RWTKAIGARPAVKRGRIVNRISGDLSTQLHERHDAGDFETKTQDKLEAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=286, Percent_Identity=72.3776223776224, Blast_Score=437, Evalue=1e-124,
Organism=Escherichia coli, GI1788640, Length=228, Percent_Identity=38.5964912280702, Blast_Score=148, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6324100, Length=258, Percent_Identity=29.4573643410853, Blast_Score=88, Evalue=1e-18,
Organism=Drosophila melanogaster, GI17864598, Length=182, Percent_Identity=31.3186813186813, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571670, Length=175, Percent_Identity=29.1428571428571, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17864592, Length=210, Percent_Identity=25.7142857142857, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 32482; Mature: 32351

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPYTPPKVWTWDKENGGKFASINRPIAGPTHDKELPVGKHPLQLYSLATPNGQKVTI
CCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEH
LLEELLARGHTGAEYDAWLIKIGDGDQFSSGFVQVNPNSKIPALLDRSVNPPQRVFESGS
HHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHCCCCCCHHHHHCCCC
ILLYLAEKFSEFIPKDPAGRTECLNWLFWQMGSAPYLGGGFGHFYAYAPEKWEYPINRFA
EEEEEHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCCCCCHHHHH
MEVKRQMDVLDRRLAETEYLAGAEYSIADIAVWPWYGGLANGVLYGDSATFLDVASYKNV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHCCEEECCCCCEEEHHHHHHH
QRWTKAIGARPAVKRGRIVNRISGDLSTQLHERHDAGDFETKTQDKLEAK
HHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
TDAPYTPPKVWTWDKENGGKFASINRPIAGPTHDKELPVGKHPLQLYSLATPNGQKVTI
CCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEH
LLEELLARGHTGAEYDAWLIKIGDGDQFSSGFVQVNPNSKIPALLDRSVNPPQRVFESGS
HHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHCCCCCCHHHHHCCCC
ILLYLAEKFSEFIPKDPAGRTECLNWLFWQMGSAPYLGGGFGHFYAYAPEKWEYPINRFA
EEEEEHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCCCCCHHHHH
MEVKRQMDVLDRRLAETEYLAGAEYSIADIAVWPWYGGLANGVLYGDSATFLDVASYKNV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHCCEEECCCCCEEEHHHHHHH
QRWTKAIGARPAVKRGRIVNRISGDLSTQLHERHDAGDFETKTQDKLEAK
HHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]