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The map label for this gene is visC [C]

Identifier: 192291324

GI number: 192291324

Start: 3218929

End: 3220125

Strand: Reverse

Name: visC [C]

Synonym: Rpal_2946

Alternate gene names: 192291324

Gene position: 3220125-3218929 (Counterclockwise)

Preceding gene: 192291328

Following gene: 192291322

Centisome position: 56.06

GC content: 66.67

Gene sequence:

>1197_bases
ATGACCCAGAGCCTGATCGAGCCTAACAGCTACGACGCCATCGTTGTCGGCGGCGGCCCCGCCGGCCTGACCGCCGCCAT
CGCGCTTGCCGACATCGGCGCAGTCACCGCATTGATCGCGCGACAAGTGCCCTACGGCGATAATCGCACTACGGCCCTGC
TCGGCGATTCGATCGACATTCTCGACCGGCTCGACGTCTGGCGCCGCTGCTCGAGCAAGGCCGCCGCCCTGCGATCGATG
CGACTGGTGGACGACACCGGCCGGTTGATCCGGGCACCAGAAGTTAAGTTCGCGTCCGATGAAATCGGCATGGACGCGTT
CGGCTACAACATCGAGAACCGTGCCCTGCTGGTCGGCCTCGAAGAACGCGCGGCCGAGCTGTCGAACCTGCAGCGTTTCG
ACGATGAAGCTGAATCAGTCGTGCCGGGCGACGACGAAGTGATCGTGCGGATGCGCGGCGGCCGAACGGTCTCGGCCAAG
CTGGTGGTCGGCGCCGACGGCCGGCAGTCCCAATGCCGCGAGGCCGCCGGCATCAAGGTGAGCAGCCGCGCCCTGCACCA
GTCGGCGCTGACCTTCAATGTCAAGACCACCCGCTCCCACGACAACATCTCGACCGAATTTCACACCAAGGAAGGCCCGT
GCGTGTTCGTGCCGCTGCCGGGTCGGCGGATGAGCATCGTCTGGGTCGCGGCGCCGAAGGAAGCGCAGCGGCTGATGGCG
CTATCCGACGACGAACTGTCTGCAGCGGCGGAAAAGCAGTCACAGTCGATCTACGGTAAGATGACCGTCGAGCCCGGCCG
CAATCTGTTTCCGCTGGCGATCGAGAAGCCCGCCGCTTACGCACAGCGGCGCATCGCGTTGGTTGGTGAGGCCGCTCACG
TCGTCCCCCCGATCGGCGCGCAGGGGTTGAATATGGGGCTCCGGGATGCCGGGGACCTCGCCGAGATCGTGCGCGACGCG
ATGGCGAATGGCACGGACATCGGCTCCGACGCTGTGATGACGCGCTATGGCCGTAGCCGCGGGCCCGACATCGCCAGCCG
CACCGCCGCGATCGACATCGCCAACCGCACCCTGCTCAGCGATCTCTTGCCCGCGCAGATGCTGCGGGCGACGGGGATGC
ATCTGATCAGCTCGGTCGGCCCGATCCGCCGGTTCGCGATGCGCGAGGGGCTGTCGCCGTTCTGGCGCTCGATCTGA

Upstream 100 bases:

>100_bases
TGCACAATCAGTTGCGGCGTTCGGTCGCGTAAATCGCCCAAAACGTTAATGTTTCGCGGCGGACTTGAAATCGTCGCAGG
CCGGGGCAATTGTCTCTGGC

Downstream 100 bases:

>100_bases
GCCCCGCTAGCCGGGGAACGGGATCTGACCGGTCCGGATCAGCCACATCACGGTGGTGAGCGTCACCACCGACACGAAGG
TGCCGATCAGCACCGCGACC

Product: 2-octaprenyl-6-methoxyphenyl hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTQSLIEPNSYDAIVVGGGPAGLTAAIALADIGAVTALIARQVPYGDNRTTALLGDSIDILDRLDVWRRCSSKAAALRSM
RLVDDTGRLIRAPEVKFASDEIGMDAFGYNIENRALLVGLEERAAELSNLQRFDDEAESVVPGDDEVIVRMRGGRTVSAK
LVVGADGRQSQCREAAGIKVSSRALHQSALTFNVKTTRSHDNISTEFHTKEGPCVFVPLPGRRMSIVWVAAPKEAQRLMA
LSDDELSAAAEKQSQSIYGKMTVEPGRNLFPLAIEKPAAYAQRRIALVGEAAHVVPPIGAQGLNMGLRDAGDLAEIVRDA
MANGTDIGSDAVMTRYGRSRGPDIASRTAAIDIANRTLLSDLLPAQMLRATGMHLISSVGPIRRFAMREGLSPFWRSI

Sequences:

>Translated_398_residues
MTQSLIEPNSYDAIVVGGGPAGLTAAIALADIGAVTALIARQVPYGDNRTTALLGDSIDILDRLDVWRRCSSKAAALRSM
RLVDDTGRLIRAPEVKFASDEIGMDAFGYNIENRALLVGLEERAAELSNLQRFDDEAESVVPGDDEVIVRMRGGRTVSAK
LVVGADGRQSQCREAAGIKVSSRALHQSALTFNVKTTRSHDNISTEFHTKEGPCVFVPLPGRRMSIVWVAAPKEAQRLMA
LSDDELSAAAEKQSQSIYGKMTVEPGRNLFPLAIEKPAAYAQRRIALVGEAAHVVPPIGAQGLNMGLRDAGDLAEIVRDA
MANGTDIGSDAVMTRYGRSRGPDIASRTAAIDIANRTLLSDLLPAQMLRATGMHLISSVGPIRRFAMREGLSPFWRSI
>Mature_397_residues
TQSLIEPNSYDAIVVGGGPAGLTAAIALADIGAVTALIARQVPYGDNRTTALLGDSIDILDRLDVWRRCSSKAAALRSMR
LVDDTGRLIRAPEVKFASDEIGMDAFGYNIENRALLVGLEERAAELSNLQRFDDEAESVVPGDDEVIVRMRGGRTVSAKL
VVGADGRQSQCREAAGIKVSSRALHQSALTFNVKTTRSHDNISTEFHTKEGPCVFVPLPGRRMSIVWVAAPKEAQRLMAL
SDDELSAAAEKQSQSIYGKMTVEPGRNLFPLAIEKPAAYAQRRIALVGEAAHVVPPIGAQGLNMGLRDAGDLAEIVRDAM
ANGTDIGSDAVMTRYGRSRGPDIASRTAAIDIANRTLLSDLLPAQMLRATGMHLISSVGPIRRFAMREGLSPFWRSI

Specific function: Not Yet Known. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=385, Percent_Identity=25.1948051948052, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI32967307, Length=373, Percent_Identity=25.4691689008043, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1789273, Length=402, Percent_Identity=30.0995024875622, Blast_Score=168, Evalue=6e-43,
Organism=Escherichia coli, GI1786883, Length=399, Percent_Identity=29.0726817042606, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1789274, Length=356, Percent_Identity=29.4943820224719, Blast_Score=134, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI25146631, Length=434, Percent_Identity=25.8064516129032, Blast_Score=134, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6321694, Length=456, Percent_Identity=20.8333333333333, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI19920760, Length=385, Percent_Identity=24.4155844155844, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42788; Mature: 42657

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSLIEPNSYDAIVVGGGPAGLTAAIALADIGAVTALIARQVPYGDNRTTALLGDSIDI
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH
LDRLDVWRRCSSKAAALRSMRLVDDTGRLIRAPEVKFASDEIGMDAFGYNIENRALLVGL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCCCCCCHHCCCCCCCCEEEEEC
EERAAELSNLQRFDDEAESVVPGDDEVIVRMRGGRTVSAKLVVGADGRQSQCREAAGIKV
HHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHCCEE
SSRALHQSALTFNVKTTRSHDNISTEFHTKEGPCVFVPLPGRRMSIVWVAAPKEAQRLMA
HHHHHHHHHEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCEEEEEEEECCHHHHHHHH
LSDDELSAAAEKQSQSIYGKMTVEPGRNLFPLAIEKPAAYAQRRIALVGEAAHVVPPIGA
CCCCHHHHHHHHHHHCEEEEEEECCCCCEECEEECCHHHHHHHHHHEEECCHHHCCCCCC
QGLNMGLRDAGDLAEIVRDAMANGTDIGSDAVMTRYGRSRGPDIASRTAAIDIANRTLLS
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHEEEEHHHHHHHH
DLLPAQMLRATGMHLISSVGPIRRFAMREGLSPFWRSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
TQSLIEPNSYDAIVVGGGPAGLTAAIALADIGAVTALIARQVPYGDNRTTALLGDSIDI
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH
LDRLDVWRRCSSKAAALRSMRLVDDTGRLIRAPEVKFASDEIGMDAFGYNIENRALLVGL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCCCCCCHHCCCCCCCCEEEEEC
EERAAELSNLQRFDDEAESVVPGDDEVIVRMRGGRTVSAKLVVGADGRQSQCREAAGIKV
HHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHCCEE
SSRALHQSALTFNVKTTRSHDNISTEFHTKEGPCVFVPLPGRRMSIVWVAAPKEAQRLMA
HHHHHHHHHEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCEEEEEEEECCHHHHHHHH
LSDDELSAAAEKQSQSIYGKMTVEPGRNLFPLAIEKPAAYAQRRIALVGEAAHVVPPIGA
CCCCHHHHHHHHHHHCEEEEEEECCCCCEECEEECCHHHHHHHHHHEEECCHHHCCCCCC
QGLNMGLRDAGDLAEIVRDAMANGTDIGSDAVMTRYGRSRGPDIASRTAAIDIANRTLLS
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHEEEEHHHHHHHH
DLLPAQMLRATGMHLISSVGPIRRFAMREGLSPFWRSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]