| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291307
Identifier: 192291307
GI number: 192291307
Start: 3195984
End: 3196562
Strand: Reverse
Name: 192291307
Synonym: Rpal_2929
Alternate gene names: NA
Gene position: 3196562-3195984 (Counterclockwise)
Preceding gene: 192291309
Following gene: 192291306
Centisome position: 55.65
GC content: 67.36
Gene sequence:
>579_bases ATGCGACGAGTATTCCTTGAGTTCCAGAACGCGATGCTGCGTTGCCTGGCCGTGAGCGGTCTTGCTCTGTCGATCGGCGT CGGCGGCGCCATCGCCCAGAGCGGCGATCTGCGCGCTCAGGATCAGACGCAGAAGCCGCCCGCAGCCGCCAACAATCAGC CGGCTCAGTCGACTGCCGACGCGCTCAAGGAAAGCCAGAAGAAGACCGACGAATTCGCCGAGGCTGCGCAGGCGATCAAC GGCCCCGCCGGCAACCCGGAATGCGTCTGGCTCGGCCGCCGCGTCGTGGTTCTGATGTGGCGCGACGATCTCGACACCGC GTTCCGCCACCTCGATATGTATGACCGCTTCGGCTGCCCGACGGGTCACATTCAGGCGGCATTCAGGTGTGTCGTGCGAT CTGGTCCTATCGACCCGAAAGCCCCCGACAGCCTCAGCGGACGCGTGCACGCATGCTGGATCAATCCGACCGCCCAGCAG CAGCCCGCCGCAGCGGCCGCAACGCCTCCCGGTCCGGCCGCGAAGCCGGCGCAAGCGCCTGCCCCGCAGCAACCGGCGGC TCCCGCGCCTGCGAAATAA
Upstream 100 bases:
>100_bases GGGATTCTGCCGAGGGCCACGCCCTATCGGCGACGAATTCAAGCGGCATCAGGTGGATCGACCGGCGCCGCGATGGCCCG GCAACGAGATCGGGGACACG
Downstream 100 bases:
>100_bases CTCCGCGGCGCGCTGGAACGGTCGGGATTTTCTCGGGTTTGGTCGCCGGACGCCCTCAATTCGCCACGGGGTCGGCCGAG TTGCTTGGACACGGGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTADALKESQKKTDEFAEAAQAIN GPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCPTGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQ QPAAAAATPPGPAAKPAQAPAPQQPAAPAPAK
Sequences:
>Translated_192_residues MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTADALKESQKKTDEFAEAAQAIN GPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCPTGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQ QPAAAAATPPGPAAKPAQAPAPQQPAAPAPAK >Mature_192_residues MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTADALKESQKKTDEFAEAAQAIN GPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCPTGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQ QPAAAAATPPGPAAKPAQAPAPQQPAAPAPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20239; Mature: 20239
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTAD CCHHHHHHHHHHHHHHHHCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ALKESQKKTDEFAEAAQAINGPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCP HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCC TGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQQPAAAAATPPGPAAKPAQAP CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC APQQPAAPAPAK CCCCCCCCCCCC >Mature Secondary Structure MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQKPPAAANNQPAQSTAD CCHHHHHHHHHHHHHHHHCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ALKESQKKTDEFAEAAQAINGPAGNPECVWLGRRVVVLMWRDDLDTAFRHLDMYDRFGCP HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCC TGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQQPAAAAATPPGPAAKPAQAP CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC APQQPAAPAPAK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA