Click here to switch to the map view.

The map label for this gene is pucBA

Identifier: 192291305

GI number: 192291305

Start: 3192230

End: 3192373

Strand: Reverse

Name: pucBA

Synonym: Rpal_2927

Alternate gene names: 192291305

Gene position: 3192373-3192230 (Counterclockwise)

Preceding gene: 192291306

Following gene: 192291304

Centisome position: 55.58

GC content: 60.42

Gene sequence:

>144_bases
ATGGCTGACAAGACGCTGACCGGCCTGACGGTCGAGGAGTCCGAAGAGCTCCACAAGCACGTGATCGATGGCACCCGCAT
TTTCGGTGCGATCGCGATCGTCGCGCACTTCCTCGCCTACGTTTACTCGCCCTGGCTGCACTAA

Upstream 100 bases:

>100_bases
CTGCTCAATGTTCGGTCGGGGGGAGCGGGTCAATATGCGCGCCATCGAGGGCCGCAACGCGGCTCGGCGATGCGCAGAAA
CCCCATTATGAGGTCTCAAA

Downstream 100 bases:

>100_bases
TTAGCTGCCCAAAGGAGTATAGAATATGAATCAAGCTCGTATCTGGACTGTGGTGAAGCCGACCGTCGGTCTCCCGCTCC
TGCTCGGCAGCGTCACCGTG

Product: antenna complex alpha/beta subunit

Products: NA

Alternate protein names: Antenna pigment protein beta chain A; LH II-A beta

Number of amino acids: Translated: 47; Mature: 46

Protein sequence:

>47_residues
MADKTLTGLTVEESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLH

Sequences:

>Translated_47_residues
MADKTLTGLTVEESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLH
>Mature_46_residues
ADKTLTGLTVEESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLH

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LHB1_RHOPA (P35106)

Other databases:

- EMBL:   X64956
- EMBL:   BX572601
- RefSeq:   NP_947996.1
- ProteinModelPortal:   P35106
- SMR:   P35106
- GeneID:   2690607
- GenomeReviews:   BX571963_GR
- KEGG:   rpa:RPA2654
- NMPDR:   fig|258594.1.peg.2639
- HOGENOM:   HBG466605
- ProtClustDB:   CLSK460250
- BioCyc:   RPAL258594:RPA2654-MONOMER
- InterPro:   IPR000066
- InterPro:   IPR002362
- Gene3D:   G3DSA:1.20.5.250
- PIRSF:   PIRSF002900
- PRINTS:   PR00674

Pfam domain/function: PF00556 LHC; SSF56918 Antenna_a/b

EC number: NA

Molecular weight: Translated: 5281; Mature: 5150

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00969 ANTENNA_COMP_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2078a024)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKTLTGLTVEESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure 
ADKTLTGLTVEESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2670551