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The map label for this gene is pucAA

Identifier: 192291304

GI number: 192291304

Start: 3192025

End: 3192204

Strand: Reverse

Name: pucAA

Synonym: Rpal_2926

Alternate gene names: 192291304

Gene position: 3192204-3192025 (Counterclockwise)

Preceding gene: 192291305

Following gene: 192291301

Centisome position: 55.57

GC content: 60.56

Gene sequence:

>180_bases
ATGAATCAAGCTCGTATCTGGACTGTGGTGAAGCCGACCGTCGGTCTCCCGCTCCTGCTCGGCAGCGTCACCGTGATCGC
GATCCTGGTGCACTTTGCTGTGCTGTCGCACACCACCTGGTTCTCGAAGTACTGGAACGGCAAGGCCGCGGCGATCGAGT
CGTCGGTCAACGTCGGCTAA

Upstream 100 bases:

>100_bases
GGCACCCGCATTTTCGGTGCGATCGCGATCGTCGCGCACTTCCTCGCCTACGTTTACTCGCCCTGGCTGCACTAATTAGC
TGCCCAAAGGAGTATAGAAT

Downstream 100 bases:

>100_bases
TCAATACTGCTCTTCTGAGCTGTATTGCCGAACCGGGCTCCGAAAGGGGCCCGGTTTTCGTTTGGGGGAACGCTTGCCGC
GGCAAGCCTTGAATGCCCTT

Product: antenna complex alpha/beta subunit

Products: NA

Alternate protein names: Antenna pigment protein alpha chain A; LH II-A alpha

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MNQARIWTVVKPTVGLPLLLGSVTVIAILVHFAVLSHTTWFSKYWNGKAAAIESSVNVG

Sequences:

>Translated_59_residues
MNQARIWTVVKPTVGLPLLLGSVTVIAILVHFAVLSHTTWFSKYWNGKAAAIESSVNVG
>Mature_59_residues
MNQARIWTVVKPTVGLPLLLGSVTVIAILVHFAVLSHTTWFSKYWNGKAAAIESSVNVG

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex alpha subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LHA1_RHOPA (P35101)

Other databases:

- EMBL:   X64956
- EMBL:   BX572601
- RefSeq:   NP_947995.1
- ProteinModelPortal:   P35101
- SMR:   P35101
- GeneID:   2690946
- GenomeReviews:   BX571963_GR
- KEGG:   rpa:RPA2653
- NMPDR:   fig|258594.1.peg.2638
- HOGENOM:   HBG662281
- OMA:   SNTTWFG
- ProtClustDB:   CLSK827288
- BioCyc:   RPAL258594:RPA2653-MONOMER
- InterPro:   IPR000066
- InterPro:   IPR002361
- InterPro:   IPR018332
- PRINTS:   PR00673

Pfam domain/function: PF00556 LHC; SSF56918 Antenna_a/b

EC number: NA

Molecular weight: Translated: 6394; Mature: 6394

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS00968 ANTENNA_COMP_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1e188a0c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQARIWTVVKPTVGLPLLLGSVTVIAILVHFAVLSHTTWFSKYWNGKAAAIESSVNVG
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCH
>Mature Secondary Structure
MNQARIWTVVKPTVGLPLLLGSVTVIAILVHFAVLSHTTWFSKYWNGKAAAIESSVNVG
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2670551