| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is sam [H]
Identifier: 192291301
GI number: 192291301
Start: 3190136
End: 3191026
Strand: Reverse
Name: sam [H]
Synonym: Rpal_2923
Alternate gene names: 192291301
Gene position: 3191026-3190136 (Counterclockwise)
Preceding gene: 192291304
Following gene: 192291299
Centisome position: 55.55
GC content: 65.21
Gene sequence:
>891_bases ATGACCCGCTCTCCCTCGATGTTGAAGGCCGCGCTGTGGATGGCCGGCTGGCTGGCGCTGATGGTGATCGTCGCCGTCGC CGGCCGCGAAACGCTGCGCGAATTGAGCGTGTTTCAGGTGATGGAACTGCGCTCGCTGATCGGCTTCGCGATGCTGTATC CGCTGATCCACAAAGCCGGCGGGCTGACCGCGATGGCAACGGCGCGGCCGCTGGCGCATCTGAGCCGCAACCTGGTGCAT TACGCCGCGCAGCTTGGCTGGTTCTACGCGCTGACGCTGATCTCGATCGGCCAAGTGGTGTCGATCGAGTTCACCATGCC GATCTGGATCGCGATACTGGCCGCGACCTTCCTCGGCGAACACATGAACGTCTGGAAGATCACCGCGGTGGTGCTCGGGC TGATCGGCGTCGTGGTGATCGTCCGTCCCGCTACCTCGTCGATCGAGCCGGGACAGCTGATCGCACTCGGCGCCGCCGTC GGCTTCGGCATCTCTGTCACGCTGATGAAGTCGCTGACCCGCACCGAGAGCACACTCGCAATCATCTTCTGGATGCTGCT CATCCAGAGCGCCGCCGGCCTCGTGCCGGCGCTGTGGCTATGGCAATGGCCGTCGGCCTATGTCTGGGTCTGGATCGTGA TCATCGCGTTTTGCGGCACGTTCTCGCACTACTGCATGGCGCGGGCGCTGACTTACGCGGATGCCACCATCGTGGTGCCG ATGGACTTCCTGCGGGTGCCGCTCTCCGCCACCGCCGGCTGGCTGATCTATGGCGAACGGCTCGACGCCTACACGGTGAT CGGCGCCGCGCTGATCCTGACCGGCAACCTGCTCAATCTGCGCGGCGCTCCGCGACCGCCCGCCGCAGCCTCGATCCGGA ATTCGTCCTAG
Upstream 100 bases:
>100_bases CAGGCGGGCCTCTGCGGCGCGGCGGTTGCCAAGCCTGCTGTTGTCGAAGATAGAGCGACGTCAGGAAACGCCGACGCCAT CAACGAGCCAAACCGCCGCG
Downstream 100 bases:
>100_bases CCGTCGAGGCCTGCGGCCTTGCGCAGCGCCGCATTGATACGGTCCTGCCAGCCGGGGCCGCCTTCCTGGAAATGTTCGAG CACAGCCTGATCGATCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTRSPSMLKAALWMAGWLALMVIVAVAGRETLRELSVFQVMELRSLIGFAMLYPLIHKAGGLTAMATARPLAHLSRNLVH YAAQLGWFYALTLISIGQVVSIEFTMPIWIAILAATFLGEHMNVWKITAVVLGLIGVVVIVRPATSSIEPGQLIALGAAV GFGISVTLMKSLTRTESTLAIIFWMLLIQSAAGLVPALWLWQWPSAYVWVWIVIIAFCGTFSHYCMARALTYADATIVVP MDFLRVPLSATAGWLIYGERLDAYTVIGAALILTGNLLNLRGAPRPPAAASIRNSS
Sequences:
>Translated_296_residues MTRSPSMLKAALWMAGWLALMVIVAVAGRETLRELSVFQVMELRSLIGFAMLYPLIHKAGGLTAMATARPLAHLSRNLVH YAAQLGWFYALTLISIGQVVSIEFTMPIWIAILAATFLGEHMNVWKITAVVLGLIGVVVIVRPATSSIEPGQLIALGAAV GFGISVTLMKSLTRTESTLAIIFWMLLIQSAAGLVPALWLWQWPSAYVWVWIVIIAFCGTFSHYCMARALTYADATIVVP MDFLRVPLSATAGWLIYGERLDAYTVIGAALILTGNLLNLRGAPRPPAAASIRNSS >Mature_295_residues TRSPSMLKAALWMAGWLALMVIVAVAGRETLRELSVFQVMELRSLIGFAMLYPLIHKAGGLTAMATARPLAHLSRNLVHY AAQLGWFYALTLISIGQVVSIEFTMPIWIAILAATFLGEHMNVWKITAVVLGLIGVVVIVRPATSSIEPGQLIALGAAVG FGISVTLMKSLTRTESTLAIIFWMLLIQSAAGLVPALWLWQWPSAYVWVWIVIIAFCGTFSHYCMARALTYADATIVVPM DFLRVPLSATAGWLIYGERLDAYTVIGAALILTGNLLNLRGAPRPPAAASIRNSS
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32126; Mature: 31995
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSPSMLKAALWMAGWLALMVIVAVAGRETLRELSVFQVMELRSLIGFAMLYPLIHKAG CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLTAMATARPLAHLSRNLVHYAAQLGWFYALTLISIGQVVSIEFTMPIWIAILAATFLGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHC HMNVWKITAVVLGLIGVVVIVRPATSSIEPGQLIALGAAVGFGISVTLMKSLTRTESTLA CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHH IIFWMLLIQSAAGLVPALWLWQWPSAYVWVWIVIIAFCGTFSHYCMARALTYADATIVVP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE MDFLRVPLSATAGWLIYGERLDAYTVIGAALILTGNLLNLRGAPRPPAAASIRNSS HHHHHCCHHHCCCEEEECCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRSPSMLKAALWMAGWLALMVIVAVAGRETLRELSVFQVMELRSLIGFAMLYPLIHKAG CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLTAMATARPLAHLSRNLVHYAAQLGWFYALTLISIGQVVSIEFTMPIWIAILAATFLGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHC HMNVWKITAVVLGLIGVVVIVRPATSSIEPGQLIALGAAVGFGISVTLMKSLTRTESTLA CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHH IIFWMLLIQSAAGLVPALWLWQWPSAYVWVWIVIIAFCGTFSHYCMARALTYADATIVVP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE MDFLRVPLSATAGWLIYGERLDAYTVIGAALILTGNLLNLRGAPRPPAAASIRNSS HHHHHCCHHHCCCEEEECCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA