| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291299
Identifier: 192291299
GI number: 192291299
Start: 3189252
End: 3189467
Strand: Reverse
Name: 192291299
Synonym: Rpal_2921
Alternate gene names: NA
Gene position: 3189467-3189252 (Counterclockwise)
Preceding gene: 192291301
Following gene: 192291298
Centisome position: 55.53
GC content: 59.72
Gene sequence:
>216_bases ATGCCGGCGATTGCTGAAGTTCTGTCGACCAACGTTCCTCGTCCCGCACCGCGCGGCAGCGATCTTCCCACCTGCCCGGT CTGCGCCGACTCGATGGTCGCAGCCGAAGCATCGGCGTATCTCACCGAAAGCGTGGTGAGCTATCTATGGACCTGCGACA CCTGCGGCTATGGTTTCGTCACCAAGCACTTGGTGAAACGCTTTTCCTGCAACTGA
Upstream 100 bases:
>100_bases TCACTTCAGTCGAACACATGCCTGACGCTTCAGTTCATTCGAACTCTCAGGCCCATTCAACCAATCAGGTCCAACGCTTT TGGAAGATGAGGAGGTCACG
Downstream 100 bases:
>100_bases GCACGACAACCGACAGGTTTGGCCAAGTGAGATGCAGCCAAGGCAGAGAGCCTTTGGTGATCGCATTTGCTCAATGAAAT GGAGCTGGACGGCGGTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MPAIAEVLSTNVPRPAPRGSDLPTCPVCADSMVAAEASAYLTESVVSYLWTCDTCGYGFVTKHLVKRFSCN
Sequences:
>Translated_71_residues MPAIAEVLSTNVPRPAPRGSDLPTCPVCADSMVAAEASAYLTESVVSYLWTCDTCGYGFVTKHLVKRFSCN >Mature_70_residues PAIAEVLSTNVPRPAPRGSDLPTCPVCADSMVAAEASAYLTESVVSYLWTCDTCGYGFVTKHLVKRFSCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7600; Mature: 7469
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIAEVLSTNVPRPAPRGSDLPTCPVCADSMVAAEASAYLTESVVSYLWTCDTCGYGFV CCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TKHLVKRFSCN HHHHHHHHCCC >Mature Secondary Structure PAIAEVLSTNVPRPAPRGSDLPTCPVCADSMVAAEASAYLTESVVSYLWTCDTCGYGFV CHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TKHLVKRFSCN HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA