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The map label for this gene is 192291298

Identifier: 192291298

GI number: 192291298

Start: 3188015

End: 3188797

Strand: Reverse

Name: 192291298

Synonym: Rpal_2920

Alternate gene names: NA

Gene position: 3188797-3188015 (Counterclockwise)

Preceding gene: 192291299

Following gene: 192291297

Centisome position: 55.51

GC content: 64.24

Gene sequence:

>783_bases
ATGGGATTTCAGATCGATCACGTCGTCGTCGCCGTCGCAAATCTCGATCAGGCCATCGTCGACTATCGCCGCCTCGGCTT
CACCGTGGAGGCCGGTGGCGAGCATCCTGGAAGGGGTTCGCGCAACGCATTGGTTGTGTTCGACGATGGTTCGTATTTCG
AATTGATTGCCTTCGACCGGCCCGCACCGGATTTCCGCTGGTGGCAGGTGCTCGACCGCTCCGGCCCTGGCCTCGTCGAC
TACGCACTGCTGCCGCGCAATATCGATGCGGACGTCGCAGCGGCACAGTCTCGCGGTCTGGACTTTGAGAATCCGGAAGC
CGGCGGACGAGAACGTCCCGATGGAGAGCGGCTGATTTGGAAGACCGCACGCTCGAAGCAGAGCGATACCCCATTCTTCT
GCGGCGACGTCACTCCGCGGGCCTTGCGAGTTCCGGAGGGTGCCGTGCGGCAGCACCCGAATGGCGCTCTGGGCATCGGT
TCGGTGGTTGTTGCGGTCAAGGACATCGACCGAAGTGTCGGCCGGTACGCCGCGCTGTTTGGAGAGCCTGCCGCCCACGT
CCATGCGTTGCCTGGACTGGGCGTGCGCATCGCACATCTCCCCGCAGATCGCAGCGCCATCACCCTGATCACACCCACTG
CCGAAGGCCCGGCCGGTCAGCGTGTCGCCGCGCACCTCAAGTCACGCGGCGAAAGCCCTTTCGCGATCGGTCTGAAAGGC
GCGCCACCGACGACGCTCGATATCAAGCTGTCGCACGGCGCGCCGCTCGAATTCATCGGCTGA

Upstream 100 bases:

>100_bases
TCAGACGTTTGGCCACGCCTTCTGTCGGCGGTCAGACGATCGACGCCACCAGCCAGAGATTTCGGCTATTGCGCACGAGC
ATGCCTCGAGAGGGAGTGAA

Downstream 100 bases:

>100_bases
CTTGTCCGATCAAAGGAGATCATCACAGCATGACCATCGATCCCCGCATCACCACCATCGCGGACGAAGCCATCGTTTGG
CGCCGAGACATCCACGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MGFQIDHVVVAVANLDQAIVDYRRLGFTVEAGGEHPGRGSRNALVVFDDGSYFELIAFDRPAPDFRWWQVLDRSGPGLVD
YALLPRNIDADVAAAQSRGLDFENPEAGGRERPDGERLIWKTARSKQSDTPFFCGDVTPRALRVPEGAVRQHPNGALGIG
SVVVAVKDIDRSVGRYAALFGEPAAHVHALPGLGVRIAHLPADRSAITLITPTAEGPAGQRVAAHLKSRGESPFAIGLKG
APPTTLDIKLSHGAPLEFIG

Sequences:

>Translated_260_residues
MGFQIDHVVVAVANLDQAIVDYRRLGFTVEAGGEHPGRGSRNALVVFDDGSYFELIAFDRPAPDFRWWQVLDRSGPGLVD
YALLPRNIDADVAAAQSRGLDFENPEAGGRERPDGERLIWKTARSKQSDTPFFCGDVTPRALRVPEGAVRQHPNGALGIG
SVVVAVKDIDRSVGRYAALFGEPAAHVHALPGLGVRIAHLPADRSAITLITPTAEGPAGQRVAAHLKSRGESPFAIGLKG
APPTTLDIKLSHGAPLEFIG
>Mature_259_residues
GFQIDHVVVAVANLDQAIVDYRRLGFTVEAGGEHPGRGSRNALVVFDDGSYFELIAFDRPAPDFRWWQVLDRSGPGLVDY
ALLPRNIDADVAAAQSRGLDFENPEAGGRERPDGERLIWKTARSKQSDTPFFCGDVTPRALRVPEGAVRQHPNGALGIGS
VVVAVKDIDRSVGRYAALFGEPAAHVHALPGLGVRIAHLPADRSAITLITPTAEGPAGQRVAAHLKSRGESPFAIGLKGA
PPTTLDIKLSHGAPLEFIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27775; Mature: 27643

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00087 SOD_CU_ZN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFQIDHVVVAVANLDQAIVDYRRLGFTVEAGGEHPGRGSRNALVVFDDGSYFELIAFDR
CCEEECEEEEEEHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECC
PAPDFRWWQVLDRSGPGLVDYALLPRNIDADVAAAQSRGLDFENPEAGGRERPDGERLIW
CCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
KTARSKQSDTPFFCGDVTPRALRVPEGAVRQHPNGALGIGSVVVAVKDIDRSVGRYAALF
EECCCCCCCCCEEECCCCCCEEECCCHHHHCCCCCCEECCCEEEEEEHHHHHHHHHHHHH
GEPAAHVHALPGLGVRIAHLPADRSAITLITPTAEGPAGQRVAAHLKSRGESPFAIGLKG
CCCHHHEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECC
APPTTLDIKLSHGAPLEFIG
CCCCEEEEEECCCCCCEECC
>Mature Secondary Structure 
GFQIDHVVVAVANLDQAIVDYRRLGFTVEAGGEHPGRGSRNALVVFDDGSYFELIAFDR
CEEECEEEEEEHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECC
PAPDFRWWQVLDRSGPGLVDYALLPRNIDADVAAAQSRGLDFENPEAGGRERPDGERLIW
CCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
KTARSKQSDTPFFCGDVTPRALRVPEGAVRQHPNGALGIGSVVVAVKDIDRSVGRYAALF
EECCCCCCCCCEEECCCCCCEEECCCHHHHCCCCCCEECCCEEEEEEHHHHHHHHHHHHH
GEPAAHVHALPGLGVRIAHLPADRSAITLITPTAEGPAGQRVAAHLKSRGESPFAIGLKG
CCCHHHEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECC
APPTTLDIKLSHGAPLEFIG
CCCCEEEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA