Click here to switch to the map view.

The map label for this gene is ssuA [H]

Identifier: 192291273

GI number: 192291273

Start: 3157528

End: 3158502

Strand: Reverse

Name: ssuA [H]

Synonym: Rpal_2895

Alternate gene names: 192291273

Gene position: 3158502-3157528 (Counterclockwise)

Preceding gene: 192291274

Following gene: 192291272

Centisome position: 54.99

GC content: 61.23

Gene sequence:

>975_bases
ATGACGACCCTATCCCGGCGCCTGATGACCAGTCTGGTCCTGGCAACAATGCTGGCGCCGACCGCTGTCATTGCCGCCGA
CAAGCCGAAGGAGATCAGGATCGATTGGGCGACCTACAATCCCGTTTCGATCGTGCTCAAGCAGCAAGGTCTGCTCGAAA
AGGAATTCGCGAAGGACGGCATCGGCATCGTCTGGGTGCAGTCGGCTGGCTCCAACAAAGCGCTCGAATTCCTCAACGCC
GGCTCGATCGATTTCGGCTCGACCGCAGGTTCGGCCGCGTTGGTTGCCAAGATCAACGGCAATCCGATCAAGTCGATCTA
TGTCTATTCACGGCCCGAATGGACTGCGCTGGTGACCACCAAGGATTCCAAGATCGCCTCCGTCGCCGACCTCAAGGGAA
AACGCGTGGCGGTGACTCGCGGCACCGATCCCCATATTTTCCTGGTGCGCGCGTTACTTGGTGCCGGCCTGAGCCAGAAC
GACATCACCCCGGTTCTGCTGCAACACGCCGATGGCAAGGCCGCGCTGATCCGCGGCGATGTCGATGCCTGGGCCGGTCT
CGATCCAATGATGGCGCAAGCCGAAGTCGAGGAAGGCGCGAAGTTGTTCTACCGCAAGCCCGAGGCCAACACCTGGGGAA
TCCTGAACGTCCGCGAGGACTTCCTCAAGGAGCATCCGGATCTGGTTCGGCGCGTGCTCGCCGTCTACGAAGACGCGCGC
AAGTACTCGCTCACTCATTACGACGAGCTGAAGCAAGCGTTCATTGGCGTCACCAAGCTGCCCGAGGCCGTGGTCGACAA
GCAGCTCAAGGAACGCACCGAACTCACACATAGCCGGATCGGCACGCCGCAGCGTGACTCTATTCTCGCCGCCGGACTGG
CGCTGCAGCAGGCCGGCGTGATCCAGCCGTCGGTCGACGTCAAAGCAGTGCTCGACACGCTGATCGACGATCAGGTGCCG
CTGCCGACCAACTAA

Upstream 100 bases:

>100_bases
AACTAACTGACAAATCTCCTGTTTCGTGGAGGTATCTTCGTCGCATCGAACGACGCGGACCGCGGAAACAACAGCAATGA
ACGAAGAGGAGAGGAAACCC

Downstream 100 bases:

>100_bases
GCACGCCACACGGCGGCTGCGGACGGCCCATCGCTCGCGAGGCGGATAGCTTGCGGGGCCGGAATGTCGGCCCCGGTAAA
TGCAGCCCCTCATTTTGAAG

Product: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTTLSRRLMTSLVLATMLAPTAVIAADKPKEIRIDWATYNPVSIVLKQQGLLEKEFAKDGIGIVWVQSAGSNKALEFLNA
GSIDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTTKDSKIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLSQN
DITPVLLQHADGKAALIRGDVDAWAGLDPMMAQAEVEEGAKLFYRKPEANTWGILNVREDFLKEHPDLVRRVLAVYEDAR
KYSLTHYDELKQAFIGVTKLPEAVVDKQLKERTELTHSRIGTPQRDSILAAGLALQQAGVIQPSVDVKAVLDTLIDDQVP
LPTN

Sequences:

>Translated_324_residues
MTTLSRRLMTSLVLATMLAPTAVIAADKPKEIRIDWATYNPVSIVLKQQGLLEKEFAKDGIGIVWVQSAGSNKALEFLNA
GSIDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTTKDSKIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLSQN
DITPVLLQHADGKAALIRGDVDAWAGLDPMMAQAEVEEGAKLFYRKPEANTWGILNVREDFLKEHPDLVRRVLAVYEDAR
KYSLTHYDELKQAFIGVTKLPEAVVDKQLKERTELTHSRIGTPQRDSILAAGLALQQAGVIQPSVDVKAVLDTLIDDQVP
LPTN
>Mature_323_residues
TTLSRRLMTSLVLATMLAPTAVIAADKPKEIRIDWATYNPVSIVLKQQGLLEKEFAKDGIGIVWVQSAGSNKALEFLNAG
SIDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTTKDSKIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLSQND
ITPVLLQHADGKAALIRGDVDAWAGLDPMMAQAEVEEGAKLFYRKPEANTWGILNVREDFLKEHPDLVRRVLAVYEDARK
YSLTHYDELKQAFIGVTKLPEAVVDKQLKERTELTHSRIGTPQRDSILAAGLALQQAGVIQPSVDVKAVLDTLIDDQVPL
PTN

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=274, Percent_Identity=30.2919708029197, Blast_Score=114, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35258; Mature: 35127

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSRRLMTSLVLATMLAPTAVIAADKPKEIRIDWATYNPVSIVLKQQGLLEKEFAKDG
CCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHCCC
IGIVWVQSAGSNKALEFLNAGSIDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT
CEEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCEEEEEEE
KDSKIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLSQNDITPVLLQHADGKAALIRGD
CCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECC
VDAWAGLDPMMAQAEVEEGAKLFYRKPEANTWGILNVREDFLKEHPDLVRRVLAVYEDAR
CHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEECHHHHHHCCHHHHHHHHHHHHHHH
KYSLTHYDELKQAFIGVTKLPEAVVDKQLKERTELTHSRIGTPQRDSILAAGLALQQAGV
HHCCHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
IQPSVDVKAVLDTLIDDQVPLPTN
CCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTLSRRLMTSLVLATMLAPTAVIAADKPKEIRIDWATYNPVSIVLKQQGLLEKEFAKDG
CHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHCCC
IGIVWVQSAGSNKALEFLNAGSIDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT
CEEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCEEEEEEE
KDSKIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLSQNDITPVLLQHADGKAALIRGD
CCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECC
VDAWAGLDPMMAQAEVEEGAKLFYRKPEANTWGILNVREDFLKEHPDLVRRVLAVYEDAR
CHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEECHHHHHHCCHHHHHHHHHHHHHHH
KYSLTHYDELKQAFIGVTKLPEAVVDKQLKERTELTHSRIGTPQRDSILAAGLALQQAGV
HHCCHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
IQPSVDVKAVLDTLIDDQVPLPTN
CCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]