| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291226
Identifier: 192291226
GI number: 192291226
Start: 3106843
End: 3107019
Strand: Reverse
Name: 192291226
Synonym: Rpal_2848
Alternate gene names: NA
Gene position: 3107019-3106843 (Counterclockwise)
Preceding gene: 192291227
Following gene: 192291218
Centisome position: 54.09
GC content: 62.71
Gene sequence:
>177_bases ATGAGCGACGCCGAATACGATCTACTGCTGGAATCGATCAGCGACGCCGTCGCTGAAAGCACGCAGGATAACGTCGTGCG TCCCGCCGTGGTGGCGACGATGCGCCGGGCCGCCAACGACAATTCGGTCGAATGGCCGCTACTGCCCTTCCCGACCGATT GGTACGCCTCCTGCTGA
Upstream 100 bases:
>100_bases AATCCGCCCATGATGGCCGATCGCTAAAATTGTAGCGATCCGCTCAACCGGCCCCACAATAGTTTTTGCCACACTCCGGT TCGGACAGGGGAGCCGAACC
Downstream 100 bases:
>100_bases GCGAGGCGCTGCTGCCGGCCTTAGCGGCCTTCCTGCGCGACGGTGTCCGCCAGCGAATCCAGATGCCGCTCCGCCAGCTC TTCGATCACCAGATCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MSDAEYDLLLESISDAVAESTQDNVVRPAVVATMRRAANDNSVEWPLLPFPTDWYASC
Sequences:
>Translated_58_residues MSDAEYDLLLESISDAVAESTQDNVVRPAVVATMRRAANDNSVEWPLLPFPTDWYASC >Mature_57_residues SDAEYDLLLESISDAVAESTQDNVVRPAVVATMRRAANDNSVEWPLLPFPTDWYASC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6432; Mature: 6301
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAEYDLLLESISDAVAESTQDNVVRPAVVATMRRAANDNSVEWPLLPFPTDWYASC CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDAEYDLLLESISDAVAESTQDNVVRPAVVATMRRAANDNSVEWPLLPFPTDWYASC CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA