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The map label for this gene is hdeD [C]

Identifier: 192291175

GI number: 192291175

Start: 3039704

End: 3040294

Strand: Reverse

Name: hdeD [C]

Synonym: Rpal_2796

Alternate gene names: 192291175

Gene position: 3040294-3039704 (Counterclockwise)

Preceding gene: 192291178

Following gene: 192291171

Centisome position: 52.93

GC content: 65.31

Gene sequence:

>591_bases
ATGTCTCTGCCAGATGACAGCCTTCGCCCTAAAGACGTCGAACACCTGCAAGCGCGCGTCGAGGCGGCCATCCGCGATCA
CTGGAAGGCCTATCTGTTCGAAGGCATTCTGCTGCTGATCATCGGTTTTGCGGCGATCCTGCTACCGCTGCTCGCCAGCA
TCACCTTCACCATCGTGCTCGGCTGGCTGTTCTTCGTCGCCGGCGTGGCAGGCATCGGCTTCTCGATCTGGGCGCGCAAG
GGCCCCGGCTTCTGGTGGTCGCTGCTGTCGGCGGTGGTGGCGCTGGTCGCCGGCCTGGTGCTGATCGCGATGCCGCTGCA
AGGCACGCGGACTCTCACCTTGATCGTCGGCGTCTATTTCCTCGCCGAGGGCGTCGCCACGATCATGTACGCCTTCCAGC
ATCGCGGCCGGATGTCGGAGCGCTGGGGCTGGATGCTCGCAGCCGGTATCGCCGACATCCTGGTGGCGTTCGTCATCATC
TCGGGCTGGCCCGGCACCGTCTGGGCGATCGGGCTGCTGATCGGCATCAACCTGGTGTTCGGCGGCACCTCGCTGATCGC
GATGGCGCTCGCCGCCCGCAAGAGCAGCTAA

Upstream 100 bases:

>100_bases
AATGTCGCGAACAATCAGACCGACCCCCTTGAACTATTAACGCCGCGGTGCGTTGCGCGGGGTAAGTTCCTGTCCGGGAA
CCATTGAAGGAGAACTTCCC

Downstream 100 bases:

>100_bases
TCGCGCGACGTCTGCCGCGGTTCGCGTCAGCAGCCGCGGCAGATGCTCTTGATCTTGCGGTCGAGCGCCGCATCGGCCGG
GTCGATCTGGTCGATCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSLPDDSLRPKDVEHLQARVEAAIRDHWKAYLFEGILLLIIGFAAILLPLLASITFTIVLGWLFFVAGVAGIGFSIWARK
GPGFWWSLLSAVVALVAGLVLIAMPLQGTRTLTLIVGVYFLAEGVATIMYAFQHRGRMSERWGWMLAAGIADILVAFVII
SGWPGTVWAIGLLIGINLVFGGTSLIAMALAARKSS

Sequences:

>Translated_196_residues
MSLPDDSLRPKDVEHLQARVEAAIRDHWKAYLFEGILLLIIGFAAILLPLLASITFTIVLGWLFFVAGVAGIGFSIWARK
GPGFWWSLLSAVVALVAGLVLIAMPLQGTRTLTLIVGVYFLAEGVATIMYAFQHRGRMSERWGWMLAAGIADILVAFVII
SGWPGTVWAIGLLIGINLVFGGTSLIAMALAARKSS
>Mature_195_residues
SLPDDSLRPKDVEHLQARVEAAIRDHWKAYLFEGILLLIIGFAAILLPLLASITFTIVLGWLFFVAGVAGIGFSIWARKG
PGFWWSLLSAVVALVAGLVLIAMPLQGTRTLTLIVGVYFLAEGVATIMYAFQHRGRMSERWGWMLAAGIADILVAFVIIS
GWPGTVWAIGLLIGINLVFGGTSLIAMALAARKSS

Specific function: Unknown

COG id: COG3247

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21166; Mature: 21034

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPDDSLRPKDVEHLQARVEAAIRDHWKAYLFEGILLLIIGFAAILLPLLASITFTIVL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWLFFVAGVAGIGFSIWARKGPGFWWSLLSAVVALVAGLVLIAMPLQGTRTLTLIVGVYF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LAEGVATIMYAFQHRGRMSERWGWMLAAGIADILVAFVIISGWPGTVWAIGLLIGINLVF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GGTSLIAMALAARKSS
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLPDDSLRPKDVEHLQARVEAAIRDHWKAYLFEGILLLIIGFAAILLPLLASITFTIVL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWLFFVAGVAGIGFSIWARKGPGFWWSLLSAVVALVAGLVLIAMPLQGTRTLTLIVGVYF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LAEGVATIMYAFQHRGRMSERWGWMLAAGIADILVAFVIISGWPGTVWAIGLLIGINLVF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GGTSLIAMALAARKSS
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA