Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291119

Identifier: 192291119

GI number: 192291119

Start: 2980856

End: 2981503

Strand: Reverse

Name: 192291119

Synonym: Rpal_2740

Alternate gene names: NA

Gene position: 2981503-2980856 (Counterclockwise)

Preceding gene: 192291133

Following gene: 192291117

Centisome position: 51.91

GC content: 63.89

Gene sequence:

>648_bases
ATGCCCGAAGTTATTTTCACCGGTCCGGCGGGCCGACTTGAAGGCCGCTACCACCCGGCGAAGCAGAAGAACGCGCCGAT
CGCGATGGTGCTGCATCCGCATCCGCAGTTCCGCGGCAACATGAACCACCCGATCGTCTATCAGGTGTATTACGCCTTCG
TGGCCCGCGGCTTCTCGGTGCTGCGGTTCAATTTCCGCGGCGTCGGCCGCAGCCAGGGGTCGTTCGACCACGGTACCGGC
GAGCTGGCGGACGCGGCCTCCGCGCTCGATTGGGCGCAGACCATCAATCCCGAAGCCCGCGCCTGCTGGGTCGCCGGCTT
CTCGTTCGGCGCCTGGATCGGCATGCAGCTCCTCATGCGCCGCCCCGAGGTCGAAGGCTTTATCTCGATCGCGCCGGAAC
CGAACCGCTACGATTTTTCGTTCCTGGCGCCCTGCCCGTCGTCCGGCCTGATCGTCCATGGCGAAAAGGACATCGTGGCG
CCGGCCAAGGACGTCAACACCCTGGTCGAGAAGTTGAAGACCCAAAAGGGCATCGTGATCGACCAGCAGACCATCCCTGG
CGCCAACCACTTCTTCGAAGACCGGATGGAGCCGCTGATGGAGACGATCACGTCCTATCTCGACATGCGGCTCGCCAACG
TCCGCTAA

Upstream 100 bases:

>100_bases
TGCCCCCTCCGCGTTGCGGCAGCCGGCGGCCGTTGCTGGCAGGACCCGCGCGCGCCCGGCGCGCCAGGCCGAATCCCACG
ATGTCGCGCAAGGATCGCTG

Downstream 100 bases:

>100_bases
GTCGCGTGGGCATCCTCTGATCCGAAAACCGGTCTTCGGTTTTCGGATCAGCCTTACGGCCGCGCCAGAAGCCCGCCGGT
CATCGGAAAGGCGACGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGNMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTG
ELADAASALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVA
PAKDVNTLVEKLKTQKGIVIDQQTIPGANHFFEDRMEPLMETITSYLDMRLANVR

Sequences:

>Translated_215_residues
MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGNMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTG
ELADAASALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVA
PAKDVNTLVEKLKTQKGIVIDQQTIPGANHFFEDRMEPLMETITSYLDMRLANVR
>Mature_214_residues
PEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGNMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTGE
LADAASALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAP
AKDVNTLVEKLKTQKGIVIDQQTIPGANHFFEDRMEPLMETITSYLDMRLANVR

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 23977; Mature: 23846

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGNMNHPIVYQVYYAFVARGFSV
CCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEE
LRFNFRGVGRSQGSFDHGTGELADAASALDWAQTINPEARACWVAGFSFGAWIGMQLLMR
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
RPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAPAKDVNTLVEKLKTQKGIVI
CCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEE
DQQTIPGANHFFEDRMEPLMETITSYLDMRLANVR
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGNMNHPIVYQVYYAFVARGFSV
CCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEE
LRFNFRGVGRSQGSFDHGTGELADAASALDWAQTINPEARACWVAGFSFGAWIGMQLLMR
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
RPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAPAKDVNTLVEKLKTQKGIVI
CCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEE
DQQTIPGANHFFEDRMEPLMETITSYLDMRLANVR
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]