Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291059

Identifier: 192291059

GI number: 192291059

Start: 2907414

End: 2908079

Strand: Reverse

Name: 192291059

Synonym: Rpal_2679

Alternate gene names: NA

Gene position: 2908079-2907414 (Counterclockwise)

Preceding gene: 192291060

Following gene: 192291058

Centisome position: 50.63

GC content: 61.56

Gene sequence:

>666_bases
ATGGCCAAGCCGAAGCCCGACGTCGTCACCTGCTCCGAATGCGGGCAATTCAATTGCTATCGTCACGACAAGCGTTATCC
CGGCATCTGCGCGACGACAGATCTGGCGCCCGAAGAGCGGCAGGAACTGGTCGAGCTGTATTCGAGCGATGCGATCGACG
CGACGCTGGCGCGCGCGGCGGCCGAGGTCGAGGGGCTGTATTATTGCAAGCTCAACCGTGTCGAAGAGACCGTTGCATTC
GCACGCCGGATCGGCGCCAAGCGGATCGGCATCGCCACCTGCATCGGCCTGATCGAAGAGACCAAGGTACTGGTCGACAT
CCTGCGCCTCGCAGGCTTCGAGACCCGCACCGCACTGTGCAAGGTCGGCTCGATCGACAAGACCGAGATTGGCGTGCCCG
AAGAGATGAAGATCAAATGCGGCCACGAGGCGTGCTGCAATCCAGTGTTGCAGGCACGGCTTCTCAATCGCGAAGGGACG
CACCTCAATGTCATCATGGGCCTGTGCGTCGGCCACGACTCGCTGTTCATCCGCCACGCGGAAGCGCCGGTGACGACACT
GGTGGTGAAGGACCGAGTACTGAGCCACAATCCGGTTGCGGCGTTCCACACCGTCAAGACCTACACCAGCCGGATGCTCG
ACAAGAAGCGGATGCAGGAGTTGTGA

Upstream 100 bases:

>100_bases
AATAACCAAATACGCAAGCCGGCTGACGCCTTACGCGATTGCGCGACCGGCGCCGGCCGGCTACGCGGAACTTAGAACCA
TCACATCTGGAAATACACTC

Downstream 100 bases:

>100_bases
GACGGTTCGCCGGTCGGCTTCCGCCCGGCCCGCAGTTTGTCAGCCCCCTCAATGCGTGAGGAGCGAGGCAGGATCACCCT
GCTCTCGCTCCTCGGCCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MAKPKPDVVTCSECGQFNCYRHDKRYPGICATTDLAPEERQELVELYSSDAIDATLARAAAEVEGLYYCKLNRVEETVAF
ARRIGAKRIGIATCIGLIEETKVLVDILRLAGFETRTALCKVGSIDKTEIGVPEEMKIKCGHEACCNPVLQARLLNREGT
HLNVIMGLCVGHDSLFIRHAEAPVTTLVVKDRVLSHNPVAAFHTVKTYTSRMLDKKRMQEL

Sequences:

>Translated_221_residues
MAKPKPDVVTCSECGQFNCYRHDKRYPGICATTDLAPEERQELVELYSSDAIDATLARAAAEVEGLYYCKLNRVEETVAF
ARRIGAKRIGIATCIGLIEETKVLVDILRLAGFETRTALCKVGSIDKTEIGVPEEMKIKCGHEACCNPVLQARLLNREGT
HLNVIMGLCVGHDSLFIRHAEAPVTTLVVKDRVLSHNPVAAFHTVKTYTSRMLDKKRMQEL
>Mature_220_residues
AKPKPDVVTCSECGQFNCYRHDKRYPGICATTDLAPEERQELVELYSSDAIDATLARAAAEVEGLYYCKLNRVEETVAFA
RRIGAKRIGIATCIGLIEETKVLVDILRLAGFETRTALCKVGSIDKTEIGVPEEMKIKCGHEACCNPVLQARLLNREGTH
LNVIMGLCVGHDSLFIRHAEAPVTTLVVKDRVLSHNPVAAFHTVKTYTSRMLDKKRMQEL

Specific function: Unknown

COG id: COG4887

COG function: function code R; Uncharacterized metal-binding protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014997 [H]

Pfam domain/function: PF08901 DUF1847 [H]

EC number: NA

Molecular weight: Translated: 24548; Mature: 24417

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPKPDVVTCSECGQFNCYRHDKRYPGICATTDLAPEERQELVELYSSDAIDATLARAA
CCCCCCCEEECCCCCCCCCEECCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHH
AEVEGLYYCKLNRVEETVAFARRIGAKRIGIATCIGLIEETKVLVDILRLAGFETRTALC
HHHCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KVGSIDKTEIGVPEEMKIKCGHEACCNPVLQARLLNREGTHLNVIMGLCVGHDSLFIRHA
HCCCCCCCCCCCCCCCEEECCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEC
EAPVTTLVVKDRVLSHNPVAAFHTVKTYTSRMLDKKRMQEL
CCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKPKPDVVTCSECGQFNCYRHDKRYPGICATTDLAPEERQELVELYSSDAIDATLARAA
CCCCCCEEECCCCCCCCCEECCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHH
AEVEGLYYCKLNRVEETVAFARRIGAKRIGIATCIGLIEETKVLVDILRLAGFETRTALC
HHHCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KVGSIDKTEIGVPEEMKIKCGHEACCNPVLQARLLNREGTHLNVIMGLCVGHDSLFIRHA
HCCCCCCCCCCCCCCCEEECCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEC
EAPVTTLVVKDRVLSHNPVAAFHTVKTYTSRMLDKKRMQEL
CCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]