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The map label for this gene is 192290981

Identifier: 192290981

GI number: 192290981

Start: 2808912

End: 2809835

Strand: Reverse

Name: 192290981

Synonym: Rpal_2598

Alternate gene names: NA

Gene position: 2809835-2808912 (Counterclockwise)

Preceding gene: 192290982

Following gene: 192290980

Centisome position: 48.92

GC content: 66.88

Gene sequence:

>924_bases
ATGACGATATCGCTGAACTCCAGTGCCGACGCCTTGCAGCGCGCGACGCCAGCGTTCCCGGCGCTGGAAGGCCGGCACCC
GTGTTTCAGCACCACGTCGGAAGGTCATGCCGCCGCAGCTCGGCTGCACCTGCCGGTCAGCCCTGGTTGCAACATCGACT
GCTCGTTTTGCAAACGCGACTTCAACCGCGGCGATCAGCGCCCGGGCGTCGCGGCGCGGCTGCTGTCCCCGGAGGACGCC
GAAGCAGTGGTCGAACGCGCGCTTGAGCTCTGCCCTTCCCTTGCTGTGGTCGGGATTGCCGGCCCAGGCGATCCGCTGGC
GACCGATCATGCGCTCGACACTTTCGCACGAATTCGTGCGCGTTGGCCGCAACTGACGCTGTGCCTCTCGACCAACGGGC
TGATGCTGCCATCACGGATCGAAGAGATTGCCGCGGTGGGGATCGAGACCCTCACGGTGACGGTCAACGCGGTCGATCCC
GAGATCCAGGCGACCATCACGCCCAAGATCGCCTGGCAACGGCGTCGCCTCGATGGCCGCGCCGCGGCCGAGCGGCTGAT
CGGCAACCAGCTCGAAGGCATCGCGCTTGCTGCCGCGCTCGGCCTCACCATCAAGGTGAACACCGTGCTGATCCCCACCG
TCAATGAGGACCACATCGGTGACGTCGCGGCCGAAGTTGCGGCCGCCGGCGCACGGATGATCAACATCATCCCGCTGATC
CCGCAGCACCGTTTCGCCAATCTGCCGGCGCCGAGCCTGATGCGGCGCTACGTCGCCCGCGCCGAGGCCGAGCGTCATTT
GCGCGTGTTCCACGATTGCCAACGCTGCCGCGCCGATGCCTGCGGCGTTCCCGGCCTCAGCGACTACACCGCCGCGCTTT
ACGGCGACGATCTCCTTGCCGAGCCAACCTTTTCGCACGGCTGA

Upstream 100 bases:

>100_bases
TTGCTGAACTCAACATCCTCGCGTTCGAGACCGACGACACCGTCGACAGCGTGGTGCGTGAGCTGGCGGAGAGCAGCTTG
CTGCGGGAGCGCTGCCCCGT

Downstream 100 bases:

>100_bases
CGCCGTCCTCCACACTCATTGAACAATTCTGAATAGGAGCCGACCATGGCCAACAAATTGAAGCAGATCGCCATCTATGG
AAAAGGCGGGATCGGCAAGT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTISLNSSADALQRATPAFPALEGRHPCFSTTSEGHAAAARLHLPVSPGCNIDCSFCKRDFNRGDQRPGVAARLLSPEDA
EAVVERALELCPSLAVVGIAGPGDPLATDHALDTFARIRARWPQLTLCLSTNGLMLPSRIEEIAAVGIETLTVTVNAVDP
EIQATITPKIAWQRRRLDGRAAAERLIGNQLEGIALAAALGLTIKVNTVLIPTVNEDHIGDVAAEVAAAGARMINIIPLI
PQHRFANLPAPSLMRRYVARAEAERHLRVFHDCQRCRADACGVPGLSDYTAALYGDDLLAEPTFSHG

Sequences:

>Translated_307_residues
MTISLNSSADALQRATPAFPALEGRHPCFSTTSEGHAAAARLHLPVSPGCNIDCSFCKRDFNRGDQRPGVAARLLSPEDA
EAVVERALELCPSLAVVGIAGPGDPLATDHALDTFARIRARWPQLTLCLSTNGLMLPSRIEEIAAVGIETLTVTVNAVDP
EIQATITPKIAWQRRRLDGRAAAERLIGNQLEGIALAAALGLTIKVNTVLIPTVNEDHIGDVAAEVAAAGARMINIIPLI
PQHRFANLPAPSLMRRYVARAEAERHLRVFHDCQRCRADACGVPGLSDYTAALYGDDLLAEPTFSHG
>Mature_306_residues
TISLNSSADALQRATPAFPALEGRHPCFSTTSEGHAAAARLHLPVSPGCNIDCSFCKRDFNRGDQRPGVAARLLSPEDAE
AVVERALELCPSLAVVGIAGPGDPLATDHALDTFARIRARWPQLTLCLSTNGLMLPSRIEEIAAVGIETLTVTVNAVDPE
IQATITPKIAWQRRRLDGRAAAERLIGNQLEGIALAAALGLTIKVNTVLIPTVNEDHIGDVAAEVAAAGARMINIIPLIP
QHRFANLPAPSLMRRYVARAEAERHLRVFHDCQRCRADACGVPGLSDYTAALYGDDLLAEPTFSHG

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moaA/nifB/pqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 32808; Mature: 32677

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISLNSSADALQRATPAFPALEGRHPCFSTTSEGHAAAARLHLPVSPGCNIDCSFCKRD
CEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
FNRGDQRPGVAARLLSPEDAEAVVERALELCPSLAVVGIAGPGDPLATDHALDTFARIRA
HCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
RWPQLTLCLSTNGLMLPSRIEEIAAVGIETLTVTVNAVDPEIQATITPKIAWQRRRLDGR
CCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEEEEEECCCCEEEEECHHHHHHHHHCCHH
AAAERLIGNQLEGIALAAALGLTIKVNTVLIPTVNEDHIGDVAAEVAAAGARMINIIPLI
HHHHHHHCCCHHHHHHHHHHCEEEEEEEEEEECCCCCHHHHHHHHHHHHCHHEEEEEECC
PQHRFANLPAPSLMRRYVARAEAERHLRVFHDCQRCRADACGVPGLSDYTAALYGDDLLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHC
EPTFSHG
CCCCCCC
>Mature Secondary Structure 
TISLNSSADALQRATPAFPALEGRHPCFSTTSEGHAAAARLHLPVSPGCNIDCSFCKRD
EEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
FNRGDQRPGVAARLLSPEDAEAVVERALELCPSLAVVGIAGPGDPLATDHALDTFARIRA
HCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
RWPQLTLCLSTNGLMLPSRIEEIAAVGIETLTVTVNAVDPEIQATITPKIAWQRRRLDGR
CCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEEEEEECCCCEEEEECHHHHHHHHHCCHH
AAAERLIGNQLEGIALAAALGLTIKVNTVLIPTVNEDHIGDVAAEVAAAGARMINIIPLI
HHHHHHHCCCHHHHHHHHHHCEEEEEEEEEEECCCCCHHHHHHHHHHHHCHHEEEEEECC
PQHRFANLPAPSLMRRYVARAEAERHLRVFHDCQRCRADACGVPGLSDYTAALYGDDLLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHC
EPTFSHG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]