| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290938
Identifier: 192290938
GI number: 192290938
Start: 2762199
End: 2762804
Strand: Reverse
Name: 192290938
Synonym: Rpal_2555
Alternate gene names: NA
Gene position: 2762804-2762199 (Counterclockwise)
Preceding gene: 192290939
Following gene: 192290937
Centisome position: 48.1
GC content: 67.99
Gene sequence:
>606_bases ATGAAAACCATCATCCGGTTCTCCTGCGGCCACAACACCTCGTCGGCAAGCTGGGCCGAACGGCTCGGCGGCCTGCCCTG CACCATCCGCGACGTCGACCTCTACGCGCTCGACGCCGAACTGCTGAACGGTGCTGACGCGCTGCTGATCGGCATGCACA TGGATCAGCGTTTCCTGCAGGCCAACGCGGCGCTGCTCGGCGATTATGTTGCGGCCGGCGGCATTGCGGTCGTCAGCGGT CACATCGCCCACCCGTTCCTGCCCGGTCTCTCCCCGGTGCAGCCGCTCGGCGGCGGCGGCCTCGCCGATCTCACCATCGC CCGCCCCCAGTCTCATCCGATCTGGGACGGCGTTGCACTCGACGACCTCATCTTCCGGCGCGGCGTCGCCGGTTTCTACG GCCATGCCTGGCACATGCCACCGGAAGGCGCGACCGTGATCCACACGATGGGGCCGGAGGCGCGACCGCTCGACTTCATC TATCGCCACGGCCGCGGCGAGGTGCTGATGCACGGCGGCAATGATCTGTGGAGCTTCGGCGGCGACGACTCGACCCGTCG CCTGCTGCCGCAGCTGATGTCCTGGCTGGTGGAGGCGCGCTCATGA
Upstream 100 bases:
>100_bases GAGAATGCGGAGCTCTCCGCGCTGAAGCGCAGCGTCGCCGATGATGTGCTGGCCGCGTCGCCCGACGCGCTGTTCGACCG GCTGTGACCTGGAGCACGTG
Downstream 100 bases:
>100_bases CCGTCGCAGTGCTCGATAGCGGCACGTACTATCATCACGAGACGATTTTCGGCAATCGCTTCCGCGACCGCTTCGATCGC GTGATCTACGCGCCGGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQANAALLGDYVAAGGIAVVSG HIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVALDDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFI YRHGRGEVLMHGGNDLWSFGGDDSTRRLLPQLMSWLVEARS
Sequences:
>Translated_201_residues MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQANAALLGDYVAAGGIAVVSG HIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVALDDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFI YRHGRGEVLMHGGNDLWSFGGDDSTRRLLPQLMSWLVEARS >Mature_201_residues MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQANAALLGDYVAAGGIAVVSG HIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVALDDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFI YRHGRGEVLMHGGNDLWSFGGDDSTRRLLPQLMSWLVEARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21642; Mature: 21642
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQ CCEEEEEECCCCCCCHHHHHHHCCCCEEEEECEEEEECHHHHCCCCEEEEEECHHHHHHH ANAALLGDYVAAGGIAVVSGHIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVAL HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH DDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFIYRHGRGEVLMHGGNDLWSFG HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEECCCCCEEEECCCCEECCC GDDSTRRLLPQLMSWLVEARS CCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQ CCEEEEEECCCCCCCHHHHHHHCCCCEEEEECEEEEECHHHHCCCCEEEEEECHHHHHHH ANAALLGDYVAAGGIAVVSGHIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVAL HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH DDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFIYRHGRGEVLMHGGNDLWSFG HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEECCCCCEEEECCCCEECCC GDDSTRRLLPQLMSWLVEARS CCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA