Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192290938

Identifier: 192290938

GI number: 192290938

Start: 2762199

End: 2762804

Strand: Reverse

Name: 192290938

Synonym: Rpal_2555

Alternate gene names: NA

Gene position: 2762804-2762199 (Counterclockwise)

Preceding gene: 192290939

Following gene: 192290937

Centisome position: 48.1

GC content: 67.99

Gene sequence:

>606_bases
ATGAAAACCATCATCCGGTTCTCCTGCGGCCACAACACCTCGTCGGCAAGCTGGGCCGAACGGCTCGGCGGCCTGCCCTG
CACCATCCGCGACGTCGACCTCTACGCGCTCGACGCCGAACTGCTGAACGGTGCTGACGCGCTGCTGATCGGCATGCACA
TGGATCAGCGTTTCCTGCAGGCCAACGCGGCGCTGCTCGGCGATTATGTTGCGGCCGGCGGCATTGCGGTCGTCAGCGGT
CACATCGCCCACCCGTTCCTGCCCGGTCTCTCCCCGGTGCAGCCGCTCGGCGGCGGCGGCCTCGCCGATCTCACCATCGC
CCGCCCCCAGTCTCATCCGATCTGGGACGGCGTTGCACTCGACGACCTCATCTTCCGGCGCGGCGTCGCCGGTTTCTACG
GCCATGCCTGGCACATGCCACCGGAAGGCGCGACCGTGATCCACACGATGGGGCCGGAGGCGCGACCGCTCGACTTCATC
TATCGCCACGGCCGCGGCGAGGTGCTGATGCACGGCGGCAATGATCTGTGGAGCTTCGGCGGCGACGACTCGACCCGTCG
CCTGCTGCCGCAGCTGATGTCCTGGCTGGTGGAGGCGCGCTCATGA

Upstream 100 bases:

>100_bases
GAGAATGCGGAGCTCTCCGCGCTGAAGCGCAGCGTCGCCGATGATGTGCTGGCCGCGTCGCCCGACGCGCTGTTCGACCG
GCTGTGACCTGGAGCACGTG

Downstream 100 bases:

>100_bases
CCGTCGCAGTGCTCGATAGCGGCACGTACTATCATCACGAGACGATTTTCGGCAATCGCTTCCGCGACCGCTTCGATCGC
GTGATCTACGCGCCGGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQANAALLGDYVAAGGIAVVSG
HIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVALDDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFI
YRHGRGEVLMHGGNDLWSFGGDDSTRRLLPQLMSWLVEARS

Sequences:

>Translated_201_residues
MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQANAALLGDYVAAGGIAVVSG
HIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVALDDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFI
YRHGRGEVLMHGGNDLWSFGGDDSTRRLLPQLMSWLVEARS
>Mature_201_residues
MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQANAALLGDYVAAGGIAVVSG
HIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVALDDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFI
YRHGRGEVLMHGGNDLWSFGGDDSTRRLLPQLMSWLVEARS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21642; Mature: 21642

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQ
CCEEEEEECCCCCCCHHHHHHHCCCCEEEEECEEEEECHHHHCCCCEEEEEECHHHHHHH
ANAALLGDYVAAGGIAVVSGHIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVAL
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH
DDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFIYRHGRGEVLMHGGNDLWSFG
HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEECCCCCEEEECCCCEECCC
GDDSTRRLLPQLMSWLVEARS
CCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTIIRFSCGHNTSSASWAERLGGLPCTIRDVDLYALDAELLNGADALLIGMHMDQRFLQ
CCEEEEEECCCCCCCHHHHHHHCCCCEEEEECEEEEECHHHHCCCCEEEEEECHHHHHHH
ANAALLGDYVAAGGIAVVSGHIAHPFLPGLSPVQPLGGGGLADLTIARPQSHPIWDGVAL
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH
DDLIFRRGVAGFYGHAWHMPPEGATVIHTMGPEARPLDFIYRHGRGEVLMHGGNDLWSFG
HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEECCCCCEEEECCCCEECCC
GDDSTRRLLPQLMSWLVEARS
CCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA