| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290848
Identifier: 192290848
GI number: 192290848
Start: 2661035
End: 2661454
Strand: Reverse
Name: 192290848
Synonym: Rpal_2464
Alternate gene names: NA
Gene position: 2661454-2661035 (Counterclockwise)
Preceding gene: 192290850
Following gene: 192290845
Centisome position: 46.33
GC content: 67.38
Gene sequence:
>420_bases ATGCGGGAATCGTTCAAAACCGTTCGGGCACTGGGACTGCTGGGCCTGCTGGCCGGCACGGTCCTAATCGCAGGCGTCGC GCCACCGCGGGCCGACGACACCGCCGAGACATTGCGCCTCGCGGTCGGTGGCGAAGCCAGCTTCAGCCTGAAAGAGAATC CGTCGACCGGCTATCGCTGGCATCTCGACACCAAAGCGAGCCGCAATCTCGACCTGGTCGAGATCTCCGACGCCGGCTAC CGCCAGGGCGGCGGGGATGTGGTGCACCAGCCGATGGTCGGTGTCCCCGGCACCCGGTCGTTCCGCATCATCGCGCGCAA GGAAGGCTCCGCCACCGCGGTGTTCGATTACTTACGCGACTGGGAGAACCAGGCTCCGGCGCAGCGCCACACCGTCACGG TCGAGATCGCGCCGCGCTGA
Upstream 100 bases:
>100_bases CCGCATGGAAGCCCCCTCACAATCTGTTGGATCGTTGCATTTGCCGGGTTAATGAATTGATAAGGATGTGGGAAACGGGA ACCTCATTCCGGGGGCGCAG
Downstream 100 bases:
>100_bases CCCGCAGCTACTCTCCGCCGGTGCGAATGAAGTCGGCGATCCGCTCGTCCTTGCGCAGCTCCGCAAGATCGTCCGCCGTC GGCAGTTGCGGCCGATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRESFKTVRALGLLGLLAGTVLIAGVAPPRADDTAETLRLAVGGEASFSLKENPSTGYRWHLDTKASRNLDLVEISDAGY RQGGGDVVHQPMVGVPGTRSFRIIARKEGSATAVFDYLRDWENQAPAQRHTVTVEIAPR
Sequences:
>Translated_139_residues MRESFKTVRALGLLGLLAGTVLIAGVAPPRADDTAETLRLAVGGEASFSLKENPSTGYRWHLDTKASRNLDLVEISDAGY RQGGGDVVHQPMVGVPGTRSFRIIARKEGSATAVFDYLRDWENQAPAQRHTVTVEIAPR >Mature_139_residues MRESFKTVRALGLLGLLAGTVLIAGVAPPRADDTAETLRLAVGGEASFSLKENPSTGYRWHLDTKASRNLDLVEISDAGY RQGGGDVVHQPMVGVPGTRSFRIIARKEGSATAVFDYLRDWENQAPAQRHTVTVEIAPR
Specific function: Unknown
COG id: COG5513
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15044; Mature: 15044
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRESFKTVRALGLLGLLAGTVLIAGVAPPRADDTAETLRLAVGGEASFSLKENPSTGYRW CCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHEEEEEECCCCEEEECCCCCCCEEE HLDTKASRNLDLVEISDAGYRQGGGDVVHQPMVGVPGTRSFRIIARKEGSATAVFDYLRD EECCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH WENQAPAQRHTVTVEIAPR HHCCCCCCCEEEEEEEECC >Mature Secondary Structure MRESFKTVRALGLLGLLAGTVLIAGVAPPRADDTAETLRLAVGGEASFSLKENPSTGYRW CCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHEEEEEECCCCEEEECCCCCCCEEE HLDTKASRNLDLVEISDAGYRQGGGDVVHQPMVGVPGTRSFRIIARKEGSATAVFDYLRD EECCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH WENQAPAQRHTVTVEIAPR HHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA