| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290697
Identifier: 192290697
GI number: 192290697
Start: 2499654
End: 2499941
Strand: Reverse
Name: 192290697
Synonym: Rpal_2309
Alternate gene names: NA
Gene position: 2499941-2499654 (Counterclockwise)
Preceding gene: 192290699
Following gene: 192290696
Centisome position: 43.52
GC content: 64.24
Gene sequence:
>288_bases ATGTCAAAGATTAGTAACTGGAAGGAGTGGGATGGCCGCGCCGATGCGGAGCTGGCCGCCCTTTACGTCGAGCAGCGCCT CGACCGCGATGCGTTGGCCGCGATGATGGGCCGATCGCTCTCGTCGATCAGCAACAGGGTCTCACGATTCAAGATGACTG AGCGCGAAAAAGTGCAGATGCGCCGATGCCTCGGCGGCTGCGAGCGGCTCTTCCCGAGCTCCTGGATCGGGCACCGCCAG TGCCCCGCCTGCTACGCGAGCAACGCCGGCCTGATGGAGTGCGCGTGA
Upstream 100 bases:
>100_bases GCGCGTGAGCGCGTCCGCCTGATGGAGCGCGACCTGACGTTGTCGAAAGTCATGAGACTGCTCGCGCGGAAGCGGGCAAA GCAGCAGCAGGAGATCGCCA
Downstream 100 bases:
>100_bases TGCAGGCAACAGGTCTCCCCCGCATCGTCCGCCCGCCGCGTCCCCCGAGGCCAGTGAAGCCATCGACTTCGTCTGCTCAC GCTCCGGCCCCACCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSKISNWKEWDGRADAELAALYVEQRLDRDALAAMMGRSLSSISNRVSRFKMTEREKVQMRRCLGGCERLFPSSWIGHRQ CPACYASNAGLMECA
Sequences:
>Translated_95_residues MSKISNWKEWDGRADAELAALYVEQRLDRDALAAMMGRSLSSISNRVSRFKMTEREKVQMRRCLGGCERLFPSSWIGHRQ CPACYASNAGLMECA >Mature_94_residues SKISNWKEWDGRADAELAALYVEQRLDRDALAAMMGRSLSSISNRVSRFKMTEREKVQMRRCLGGCERLFPSSWIGHRQC PACYASNAGLMECA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10792; Mature: 10660
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 10.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKISNWKEWDGRADAELAALYVEQRLDRDALAAMMGRSLSSISNRVSRFKMTEREKVQM CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRCLGGCERLFPSSWIGHRQCPACYASNAGLMECA HHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure SKISNWKEWDGRADAELAALYVEQRLDRDALAAMMGRSLSSISNRVSRFKMTEREKVQM CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRCLGGCERLFPSSWIGHRQCPACYASNAGLMECA HHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA