| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is 192290695
Identifier: 192290695
GI number: 192290695
Start: 2498699
End: 2499031
Strand: Reverse
Name: 192290695
Synonym: Rpal_2307
Alternate gene names: NA
Gene position: 2499031-2498699 (Counterclockwise)
Preceding gene: 192290696
Following gene: 192290694
Centisome position: 43.51
GC content: 61.26
Gene sequence:
>333_bases ATGAAAGTCACGGACTACACCTTGGACCCGCGCAATGCGCGCGCTGTCAAATTTCTCCAGAGCCGTCCAATTCAAATCGG CGAGCCTTTTGCGACGAGCGTCGCCCTATTTCTCACCTCAGCAAGCTATCGGTCGCGCAAGCAGCGTGAGGCGATCGAGG CGATGATCGAGCGGACTGGATGGACCGAGCCGGACCCGCTCCCGCCGGCGATCGACGACCGCGGCGAGCGCGTAATGTCT ACGTCGATCCGGGGAGGCACCCTGGCAACGATTTCATGCACGAGCTTGCCGCACGCTACAAAGAAACCCCTGGAAAGATC GGCGTCCGGCTGA
Upstream 100 bases:
>100_bases AGGAGCGTGTCAGCAGGACAATCCCGCGCCGACGTCCGGCTGCGGAGCCGAAGAAGGCGCCCTTGCTGACGCCCGACGAC ATCCCGTTTTGAGGCCACCA
Downstream 100 bases:
>100_bases CACGACCCAGTCTATAAGACCGTCCTTGAGCCGTCGGACAAAAGCCGGCTCGGGGTGCATAGACTGAGCACGTCCTGGGG GACCTACCAACTCGCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTGWTEPDPLPPAIDDRGERVMS TSIRGGTLATISCTSLPHATKKPLERSASG
Sequences:
>Translated_110_residues MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTGWTEPDPLPPAIDDRGERVMS TSIRGGTLATISCTSLPHATKKPLERSASG >Mature_110_residues MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTGWTEPDPLPPAIDDRGERVMS TSIRGGTLATISCTSLPHATKKPLERSASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12105; Mature: 12105
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTG CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC WTEPDPLPPAIDDRGERVMSTSIRGGTLATISCTSLPHATKKPLERSASG CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHCCCCC >Mature Secondary Structure MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTG CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC WTEPDPLPPAIDDRGERVMSTSIRGGTLATISCTSLPHATKKPLERSASG CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA