Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192290695

Identifier: 192290695

GI number: 192290695

Start: 2498699

End: 2499031

Strand: Reverse

Name: 192290695

Synonym: Rpal_2307

Alternate gene names: NA

Gene position: 2499031-2498699 (Counterclockwise)

Preceding gene: 192290696

Following gene: 192290694

Centisome position: 43.51

GC content: 61.26

Gene sequence:

>333_bases
ATGAAAGTCACGGACTACACCTTGGACCCGCGCAATGCGCGCGCTGTCAAATTTCTCCAGAGCCGTCCAATTCAAATCGG
CGAGCCTTTTGCGACGAGCGTCGCCCTATTTCTCACCTCAGCAAGCTATCGGTCGCGCAAGCAGCGTGAGGCGATCGAGG
CGATGATCGAGCGGACTGGATGGACCGAGCCGGACCCGCTCCCGCCGGCGATCGACGACCGCGGCGAGCGCGTAATGTCT
ACGTCGATCCGGGGAGGCACCCTGGCAACGATTTCATGCACGAGCTTGCCGCACGCTACAAAGAAACCCCTGGAAAGATC
GGCGTCCGGCTGA

Upstream 100 bases:

>100_bases
AGGAGCGTGTCAGCAGGACAATCCCGCGCCGACGTCCGGCTGCGGAGCCGAAGAAGGCGCCCTTGCTGACGCCCGACGAC
ATCCCGTTTTGAGGCCACCA

Downstream 100 bases:

>100_bases
CACGACCCAGTCTATAAGACCGTCCTTGAGCCGTCGGACAAAAGCCGGCTCGGGGTGCATAGACTGAGCACGTCCTGGGG
GACCTACCAACTCGCCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTGWTEPDPLPPAIDDRGERVMS
TSIRGGTLATISCTSLPHATKKPLERSASG

Sequences:

>Translated_110_residues
MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTGWTEPDPLPPAIDDRGERVMS
TSIRGGTLATISCTSLPHATKKPLERSASG
>Mature_110_residues
MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTGWTEPDPLPPAIDDRGERVMS
TSIRGGTLATISCTSLPHATKKPLERSASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12105; Mature: 12105

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTG
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
WTEPDPLPPAIDDRGERVMSTSIRGGTLATISCTSLPHATKKPLERSASG
CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MKVTDYTLDPRNARAVKFLQSRPIQIGEPFATSVALFLTSASYRSRKQREAIEAMIERTG
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
WTEPDPLPPAIDDRGERVMSTSIRGGTLATISCTSLPHATKKPLERSASG
CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA